KEGG   Equus asinus (ass): 106825398
Entry
106825398         CDS       T04645                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X2
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
eai  Equus asinus (ass)
Pathway
eai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106825398 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eai03400]
    106825398 (TDP1)
DNA repair and recombination proteins [BR:eai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     106825398 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 106825398
NCBI-ProteinID: XP_014687613
UniProt: A0A8C4MSH5
LinkDB
Position
7:61036628..61118482
AA seq 611 aa
MSQEGNYGRWTISSSDESEEEKPKLDKPSSSFLPHAGQGAANEPRYTCSEARKAAHRRKL
SPVKFSNTDSASEVLPPKRQKSGSQEDLGWCLSSSDDELQQETQQKQAKKVAVKEEKGIS
PPRDAAPQRTGKPGPPTSFRLKEEEDEYETSGEGQDMWDMLDKGNPFQFYLTRVSGIKPK
YNSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAH
LHAQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLLHADWHQKTQGIW
LSPLYPRIVHGTHSSGESTTHFKADLISYLMAYNAPSLKEWIDVIQEHDLSETNVYLIGS
TPGRFQGSQKDNWGHFRLRKLLKEHASSIPKAESWPIVGQFSSIGSMGADESKWLCSEFK
ESLVTLGKESKTPGKSVSPFHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYF
HKWSAETSGRSNAMPHIKTYMRPSPDFSQIAWFLVTSANLSKAAWGALEKNGAQLMIRSY
ELGVLFLPSAFGLDSFKVKQKFFSDNQEPTASFPVPYDLPPELYGSKDRPWIWNIPYIKA
PDTHGNMWVPS
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggcaattatgggaggtggacgatatccagtagcgatgaaagtgaagaa
gaaaagcccaaactggacaagccatcctcctcttttctcccccatgctgggcagggagca
gcaaatgagccacgctacacctgttccgaggctcggaaagctgcccacaggaggaagcta
tcacccgtgaaattcagcaacacagactcggcctcagaagttttgcctcccaaaaggcag
aagagtggttcccaggaagacctaggttggtgtctatccagcagcgatgatgagctgcaa
caagaaacacagcagaagcaggcgaagaaagtggcagtcaaagaggagaaaggcatctct
cctcccagagatgctgcgccccaaagaactggaaagcctggtcctcccaccagcttcagg
ctcaaagaggaggaagatgagtatgagacgtcaggagaaggccaagacatgtgggacatg
ttggataaagggaaccccttccaattttacctcactcgagtctcaggaattaagccaaag
tataactccggagccctccacatcaaggatattttatctcctctattcgggacacttgtt
tcttcagctcagtttaactactgctttgacgtcgactggcttgtaaaacagtatccaccg
gaattcaggaagaaaccgatcctgcttgtgcatggtgataaacgggaagctaaggcccac
ttacatgcccaggcaaagccttatgaaaacatttccctctgccaggcgaagttggatatt
gcatttggaacacaccacacgaaaatgatgctactgctatatgaagaaggcctccgggtt
gtcatacacacctccaacctcctgcacgctgactggcaccagaaaacacaaggaatatgg
ttgagccccttgtacccacgaattgtccatggaacccacagctctggagaatcaacaaca
cattttaaagctgatctcatcagctacttgatggcttataacgctccttctctcaaggag
tggatagatgtcatccaggagcatgatctctctgaaacaaatgtttacctcattggatca
accccaggacgctttcaaggaagtcaaaaagacaactggggacattttaggcttaggaag
cttctgaaagaacatgcctcctccatacccaaagcagagtcttggccgatagtaggtcag
ttttcaagcattggctccatgggggctgacgaatcaaaatggttgtgttctgagttcaaa
gagagcttggtgacattgggaaaggaaagcaagaccccagggaaaagtgtcagtcccttt
catttgatctatccttctgtggaaaatgtacggaccagcttagaaggatatccagctggg
ggctctctgccctatagcatccagacagcagaaaaacagaattggctccattcctatttt
cataaatggtcagctgagacatctggccgcagcaatgccatgccacatattaagacatat
atgaggccctctccagacttcagtcaaattgcttggttccttgtcacaagcgcaaatctg
tccaaggccgcctggggagcgttagagaaaaacggcgcccagctgatgatccgctcctac
gagcttggggtacttttcctcccttcagcgtttggcctagacagcttcaaagtgaaacag
aaattcttctcggacaaccaggagccaacagcctcctttcccgtgccatatgatctgcct
ccagaactgtacggaagtaaagatcggccatggatttggaacattccttatatcaaagca
ccagatacacacgggaatatgtgggttccctcctga

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