Equus asinus (ass): 106825647
Help
Entry
106825647 CDS
T04645
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eai04131
]
106825647 (VPS13A)
Membrane trafficking [BR:
eai04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106825647 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Mannitol_dh
DUF5764
Motif
Other DBs
NCBI-GeneID:
106825647
NCBI-ProteinID:
XP_014688030
UniProt:
A0A9L0JVD3
LinkDB
All DBs
Position
3:82743976..82974624
Genome browser
AA seq
3169 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKIKVG
HIGILNLVIPWKNLYTQPVEAVLEDIYLLIVPSSKIKYDALKEEKQLLEAKQRELNRIEE
AKQKVADQEKERVEKQDTFTEKLITQIIKNLQVKISSIHVRYEDDITNRDKPLSFGISLQ
NLSMQTTDQYWVPDLHDETEKLFRKLIRLDNLFAYWNVESQMFYLNDYEESLGSLKSGIV
HENIVPEGYDFVFRPISAVAKLQMNRRSDFDFSAPKINLDVELHDIAIEFNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLQHHAREWWAYAIYGILEVNVSPRLRMWSWKHIREHRQ
KMKQYKELYKKKLINKKPSGELLVTLEELEKTLDVFNITISRQQAEVEVKKAGYRIYREG
AKDSEENKGWFSWLWTWSESNTKEQPDVKPGILEEMLTPEEKALLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKQEKPELLDIVVEEFSTYIVQRPGAQAIKFETKIDSFH
VTGLPDNSSKPRLLSSLDDATSLFQITFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKDVHLAQLTSATLTKLEEFREKTATGLMYIIETQKVLDLKINLKASYVIIPQD
GIFSPTSNLLLLDLGHLKVTSKTRSELLDMKQGGAKLEEIMHRAYDSFDVQLTSIQLLYS
RAGDNWKEARKLNVSAQHILIPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELVESIPKPKPATEVHGPAKSFQMQRSVSLGTSQISQKMFPVLEIPCVEDDSEEE
FFDAPCSPLEEPLQPPTTVKSYQQKKLPKTTCSKNMTQYKIRFEVPEVLIQFCHLVGDCE
LPVVEIDVLGLGTEIELRTFDLKANAFLKEFCLKCPKYFDANEKPVYLITTLDNTMEDLL
TLEYVRAEKNVPNLKSTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPQLEEKSA
SLYVAETEDKGEVIRKIPLKLPKNEDIITLQILAELSSIQIFIQNQKRNISEIKIEGLDS
ELIMRPSVTEINAKLRNIVVLDSDITAVYKKAVYITGKEVFSFKMISYMDATAGSAYTDM
NVVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQEAKQALTEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSNPPPIIDLITI
KLSEMRLYRTQFINDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFI
LSQEDLTTIFKTLYGNIWYEEGDSASPVGVKDQHTVASGVSSSHSGGTTVVTAAVVEVHS
RASQIKTTLNMSFKTDYLTMVLYSPGPEQTSFRDVRDPSLKLAEFKLENIISTLKMYSDD
STSSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVRYRRVRDGWVTDLVLQET
YICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEVPIQESVKWEINIIIKNPEIVF
VADMTRNDAPALVITTQCEICWLGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVLQP
CDLFYQSTQTGTDPQVIDVSVKSLTLKVSPVIINTVITITSALYTTKETIPQETASSTAH
LWEKKDTKSLKMWFLEEPNEVENIAPTTELVPKGEMIRMNIDSIFIVLEAGVGHRTVPML
LAKSRFSGEGKNWSTLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIK
MKKKAKKAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLIMLNNLVKAFTEAAT
RPSAVFVRDLAPFLILNSLGLTITVSPSDSFSVLNVPMAKSYVLKNEESLSMDYFGTKDN
DHFNAMTSLSSKLFFILLTPANHSATDKIPLTKVGRRLYTVRHRESGVERSIVCQIDGEE
GSKKITIRSPVQIRNHFSIPISVYGRDTLLGTASPGNEFNIPLAFYRSLLFLKPEDEDYQ
MCEGIDFEEIIKNDGTFLKKKCRPKTSSKKPFIINIVPEKDNLTSLSVYSEDGWDLPYIM
HLWPPVLLQNLLPYKIAYYVEGIEHRVSTLNEGHSAQICTVQLDKAKLRLKLLDYLNHDW
KSEYHIKSNQQDISFINFTCVTELEKTDLDIAVHVTYNTGQTVVAFHSPYWMVNKTGRML
QYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVKC
KGLKMEYQVGVTIYLSSFNITRIVTFTPFYMIENKSKYRISVAEEGNDKWFSLDVEQCIP
FWPEDASNKLLIQVERNEGPPKKIHFKKQENCILLRLDNKLGGIIAEVNLAENSTVIKFL
DYHDGAATFLLINHTKNDIVQYMQSSLSEVEDSLPPGKAVFYTWADPVGSRKLKWICGKS
HGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIV
LALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEREFKEYA
ESSPSEDKVIELDTNIPVRFTPTGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSFRI
QIYRIQIQNQIHGAVFPFVFYPIKPPKSITMDSAPKPFTDVSIVMRSAGHSQISRIKYFK
VLIQEMDLRLDLGFVYALAELMTEAEVTEKTEIELFHKDIEAFQEEYKTVSSVDSSQVSL
YEYFHISPIKLHLSVSLSSGKEAKDSEQHGGLLAVHSLNLLLKSIGATLTNVQDVVFKLA
FFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFFYE
PYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRITSAMAKGVAAMTMDEDYQQKRR
EAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAV
ARPTGGIIDMASSTFQGIKRATETSDEVASLRPPRFFNEDGVIRPYRLRDGTGNQMLQVI
ENGRFAKYKYFTHVMINKTDMLMITKSGILFVTKGTFGQLTCEWQYSFDEFTKEPFIVHG
RRLRIEAKERVKSVFHSKEFGKIINFKTPEDARWILTKLEEAREPSPRL
NT seq
9510 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggattatgtggtg
aacttggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgccctgagtcaacttgatgtgccatttaaaattaaagttggt
catataggtattcttaatcttgtaattccatggaaaaacctttatactcaaccagttgaa
gctgtattggaagacatttatttactcatagtgccttcttctaaaataaaatatgatgct
ttaaaagaagaaaaacaacttttagaagcaaagcaacgggaactaaatagaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaagaacgggtggagaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccagcatccatgtt
cgttatgaagatgatatcacaaatcgggacaaaccactgtcatttggtatttcccttcaa
aatctcagcatgcagaccactgatcaatactgggttccagatttacatgatgaaactgag
aaactatttcgtaagttaatccgattggataacctttttgcctattggaatgtggagtct
cagatgttttatcttaatgattatgaggaatcattgggcagcttgaagagtggtattgtc
catgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctgttgct
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaagataaatctggat
gttgagttacatgacatagcaattgaatttaataaaccgcagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacacaaaatctgccatataggaaattcaaacctgat
gtacctctgcaacaccatgccagagaatggtgggcttatgctatctatggtattcttgaa
gtaaatgtttctccccgcttacggatgtggtcatggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaataaataagaagccatctggt
gaacttctcgtcactttggaggagttggaaaagaccttggatgtatttaatataactata
tccagacaacaggcagaagttgaggtaaagaaagctggatacaggatttatagagaagga
gcaaaagattcagaggaaaataaaggatggtttagctggctgtggacttggtcagaatca
aatactaaagaacaaccagatgttaaacctggaattcttgaagaaatgttgacacctgaa
gaaaaagctttgctctatgaagcaattggctatagcgaaacagcggttgatccaaccttg
cccaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtcaattgttcta
agagaaaaacaagaaaaacctgagttgttagatattgtagtagaagaatttagcacttac
attgtgcagagaccaggagcacaagcaattaaatttgaaaccaaaatagattcatttcat
gttactggattgccagataattcatcaaaaccccgcctcctgtcttcattggatgatgct
acatcactcttccaaattacatttgagataaatccattagatgaaacagttgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaactgtgaatagtata
gtggaattcttcagacctccgaaagacgtacatctagcacaactcacttcagcgactttg
acaaaacttgaagaatttcgagagaagacagcaacaggtctgatgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatgtcattatcccacaagat
ggaatttttagccctacatcaaatctacttcttttggatcttggtcatctaaaggtgaca
agtaaaactcgatcagaattactggatatgaaacaaggtggggccaaacttgaagagata
atgcatagagcttatgattcctttgatgttcaactgacaagcatacagctgctttacagc
agagctggtgataattggaaagaagcacgaaaactcaatgtgtctgcacagcatattttg
atacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataagaatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaagggattttggaattggttgaaagcattccaaaacccaaacctgcaactgaagta
catggccctgccaaatcatttcagatgcaaagatccgtttctttgggaacatcacagatt
tcacagaaaatgtttcctgtcttggaaattccatgtgttgaagatgattctgaggaagaa
ttttttgatgcaccgtgtagtcccttggaggaacctcttcaacctccaactacagttaaa
agttatcaacagaaaaagcttccaaagacgacttgttcaaaaaatatgactcagtataaa
ataagatttgaggtgccagaggttttgattcagttttgtcaccttgttggagattgtgaa
ctgcctgtggtagaaattgatgtcttaggattgggcacagaaattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcttaaaatgcccaaaatactttgat
gcaaatgagaaaccagtttatttgattacaacactggataacacaatggaagatctgtta
acactggaatatgtgagggctgaaaagaatgtacccaacttgaaaagtacctataacaat
gtagtgcaactaattaaggtgaatttttcctctttggatattcatttacatactgaagct
cttctgaatacaataaattattttaataatatcttaccacaattggaggaaaaatcagcc
tcattgtatgttgcggagactgaagacaaaggagaggtcattagaaaaatacctttaaaa
ctacccaagaatgaagatattattaccttgcagattttagcagaattatcaagtatacag
atctttattcaaaatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagttgataatgaggccttcagtaactgaaataaatgcaaagctaaggaatatagttgtt
ttggattctgatataacagctgtatacaaaaaggctgtttatatcactggaaaagaggtt
ttcagcttcaaaatgatttcttacatggatgcaactgcaggttctgcatacacagatatg
aatgtggttgacgttcaagttaacttaactgttggttgcattgaagtagtttttgtcaca
aaatttctatattccatattggcttttatagacaattttcaagaagctaaacaagccttg
actgaggcaactgttcaggcagcaggaatggctgctactggtgtaaaagaactggcacaa
aggagttctagaatggcattggatgttaacatcaaagccccagttgtggtcatcccacag
tctccagtgtctgaaaatgtttttgttgctgattttggactaattacaatgacgaatacg
ttccatatgataacagagagtcagagcaaccccccacccattattgatttgataacgata
aagctgagtgaaatgcgactgtacaggactcaatttattaatgatgcgtatcaagaagta
ctggatctactactgccattaaatcttgaggtgattgttgagcgaaatttgtcctgggag
tggtaccaggaagttccttgttttaatgtaaatgctcaactaaagcctatggagttcatt
cttagtcaagaagatttaacaactatttttaaaacattatatggcaatatatggtatgaa
gaaggtgatagtgcctcacctgtaggagtaaaagatcagcatactgttgctagtggagtt
agttcatcccattcaggaggaacaactgtagtgacagctgctgtggtagaagtacattca
cgtgcctctcaaattaagacaacactaaacatgagtttcaaaactgattatctcaccatg
gtactgtatagtccaggccccgaacagacttcctttagagatgttcgtgatccttctctg
aagcttgctgaatttaagttggagaatattataagtactttaaaaatgtattcagatgac
tcgacatcatcttccttctcattaaaaaactgtattttagatgataaaaggcctcatgtc
aagaaggcaactcctagaatgataggactgacagttggctttgacaaaaaggacatgatg
gatgtaaggtatagaagagtcagagatggttgggtgactgatttagtccttcaagaaacg
tacatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgaggcttac
accacgggcactgctgtagaaaccagtgtccaaacatggactgctaaggaagaagtacct
atacaggagtcagtgaagtgggaaattaatattattattaaaaatcctgaaattgtgttt
gtggctgatatgacaagaaatgatgctcctgccttagtcattacaacacagtgtgaaatt
tgttggttaggtgaccttgaaaacaatacaatgactgctgccattaaagatctccaagtg
agagcgtgcccatttcttccagtaaagagaaaaggcaaaatcactactgttttgcaaccc
tgtgacttgttctatcaatctactcagacagggacagatccacaagtgattgatgtatca
gtaaaatccctgacgctaaaggtttcaccagttatcataaatactgtgattaccataact
tcagcactttatacaactaaggaaaccatcccacaagaaacagcttcttctacagcacat
ttatgggaaaagaaggatacaaagagtttaaaaatgtggtttcttgaagaaccaaatgaa
gttgaaaacatagctcccacaactgaattagtacccaaaggagagatgataagaatgaac
attgattctatttttatagttcttgaggctggagttggtcatagaacagtgcctatgctt
ttggcgaaatcacgtttttcaggagaaggcaaaaactggagtaccctaataaatctccat
tgtcagcttgaactggaagtgcattattacaatgaaatgttcggtgtatgggagcctttg
cttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatcaag
atgaaaaagaaagcaaaaaaggccattgttgagtcagatactgaagaagaaaattacaaa
gtcccagaatataaaactgtcatcagttttcattccaaagaccaactaaacattacatta
tccaaatgtggccttataatgttaaataatttagtcaaggcgtttacagaagctgccact
agaccttcagctgtcttcgtaagggatctcgcaccatttctgattttaaattctcttgga
cttactatcactgtttcaccaagtgattcttttagcgtactcaatgttcctatggcaaaa
tcatatgtattgaaaaatgaggaaagtttaagtatggattattttggaactaaagacaat
gatcatttcaacgcaatgaccagcctaagcagcaagctcttcttcattcttcttacacct
gctaaccactctgctacggataaaattcctttaacaaaagtgggacgacgactgtacact
gtgagacacagagagtctggagtcgaaagatctatcgtttgtcaaattgatggagaagaa
ggaagtaagaagataacaattcgctccccagtgcagattagaaaccatttttcaatccca
atttctgtttatggaagggacactttattgggaacggcttcacctggaaatgaattcaac
ataccattagcattttaccgatcactcctttttctgaagccagaagatgaggactatcaa
atgtgtgaaggaattgactttgaagaaattataaaaaatgatggcacttttctaaagaag
aaatgtagacctaaaacctcttccaagaaaccatttatcattaatattgtcccagaaaaa
gataatttaacatctctgtcagtatattcagaagatggttgggacttaccatacataatg
catctgtggccgcctgtcctactccaaaatcttcttccttataagattgcttattatgta
gaggggattgagcatagagtttctactctaaatgaaggacattcagcccagatttgtact
gtacagttggataaagcaaagctacgtttaaaattacttgactatcttaatcatgactgg
aaaagtgaatatcatataaaatctaatcaacaagatattagtttcatcaattttacctgt
gttacagaattagaaaagactgatttagatattgctgtccatgtgacttataatactggc
cagacagttgtggcatttcatagtccttattggatggtcaataaaactggtcgaatgttg
cagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagccagttctc
ttttcttttcagccaaagcacttttttaataacaataaggttcagcttatggtaactgat
agtgaattgtcagatcagttttcaattgatactgttggtagtcatggagctgtcaaatgt
aaaggcctgaaaatggaatatcaagttggtgtcactatatacctcagcagttttaacatt
accagaattgtgacatttacccctttttatatgattgaaaataaaagcaaatatcggata
tcagtggctgaagagggaaatgataaatggttctctcttgatgtagagcagtgtatcccc
ttttggcctgaggatgcttctaataaacttctgattcaagttgaaagaaatgaaggccct
cccaaaaagatacattttaagaagcaagaaaattgtattttattgcgtctagataacaag
cttggaggtattatagcagaagttaacttggctgagaattctacagttattaaatttttg
gattatcatgatggagcagctacattcctgttaataaatcacaccaagaatgacattgtt
cagtacatgcaaagttctctcagtgaagtagaagattccctccctcctggaaaagcagta
ttttatacatgggctgatccagtgggctctagaaagctgaagtggatatgtggaaaaagc
catggtgaagtaacacaaaaggatgatatgatgacacctataaatttggggaaaaagact
atttatttagtttcattctttgaaggcttacagcgcattattttattcactgaagatcca
agggtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaggaaatcgtg
ttggcattacaagatgttggaatttctctcgtcaacaattacacaaagcaagaagtagcc
tatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggcaaga
tggaagccaatgagtgttaaacacactgagaagttagagagagaatttaaggaatatgct
gaatcttcaccttcagaagataaggttatagagttggacactaacattccggttcgcttc
acacctactggtactaacatgaaaattctgcaaccacatgtaatagctatacgaagaaat
tatcttccagcattgaaagtggaatatagcacatctgcacaccagtcatcctttagaatt
caaatttatagaatacagatccaaaaccagatacatggtgctgtatttccatttgtgttt
tatcctattaaacctcccaagtcaatcaccatggattcagcaccaaagccctttacagat
gtcagtattgtcatgagatctgcagggcattcccaaatatcacgtattaagtacttcaaa
gtgttgatccaagaaatggatctcaggttggatcttggctttgtctatgctttagcagaa
cttatgacagaagctgaagtgactgaaaaaacggagattgaactttttcataaagatata
gaagctttccaagaagaatataaaacagtttcatcggtagattcatcacaagtcagtctc
tatgaatattttcatatatctcctatcaagttgcatttaagtgtttcactgagttcgggt
aaagaagctaaagattcagaacaacatggagggctgcttgcagttcattctttaaatctg
ttactgaagagtattggtgccactcttacaaatgtacaagatgtagtttttaagcttgca
ttttttgaactcaactatcagttccatacaacatctgaactacagtctgaagtaataaga
cactactcaaaacaggccattaagcagatgtatgtactcattcttggacttgaagttttg
ggaaacccttttggcttgattagagaattttctgaaggtgtagaagcatttttttatgaa
ccttaccagggagccattcagggtcctgaagagtttgtggagggaatggcactagggctg
aaggcactagttggtggagctgttggtggattagctggtgctgcctccagaatcaccagt
gctatggctaaaggggtagcagctatgactatggatgaagactaccaacagaagagaaga
gaagccatgaataagcagccagctggtcttagagaaggcatcactcgtggaggaaaaggc
ttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaaggagct
caaaaagaaggggcagctggtttctttaaaggtgttgggaaaggtttagttggagcagtg
gcaaggccaacaggaggcatcatagacatggctagcagtacgtttcagggaataaaaaga
gctacagagacttctgatgaagtggcgagtctgcgacctcctcgattctttaatgaagat
ggagttatcagaccttacaggttgagggatggcactggaaatcaaatgttacaggtcata
gaaaatggaagatttgcaaaatataaatattttacccatgtcatgataaataaaacagat
atgttgatgataaccaaaagtggtatattgtttgtaacaaaaggaacatttggacagctt
acatgtgagtggcagtatagttttgatgagtttaccaaagagccattcattgttcatgga
agacgattgcgcattgaagcaaaggaacgagtgaagtctgtattccactccaaagagttt
ggaaaaataattaacttcaagacccctgaggatgctaggtggatcctcacaaagctagaa
gaagcaagagaaccttccccgaggctctga
DBGET
integrated database retrieval system
