Equus asinus (ass): 106825979
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Entry
106825979 CDS
T04645
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
eai
Equus asinus (ass)
Pathway
eai01524
Platinum drug resistance
eai03430
Mismatch repair
eai05200
Pathways in cancer
eai05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106825979 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106825979 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
106825979 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
106825979 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eai03400
]
106825979 (MSH6)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106825979 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
106825979
NCBI-ProteinID:
XP_044628313
UniProt:
A0A9L0JD26
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Position
6:41404689..41423789
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AA seq
1401 aa
AA seq
DB search
MSRQSTLYSFFPKSPALNNANKAPVRASGEGGAAAAATGASPSPGGDAAWSEAGPGPGPL
AGSAAPPAARNLNGGLRRSAAAAVPARSVGGGRGPKTEARRWGACSRGREARLGTGGSGA
RPRARRSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPT
RGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEP
SEPEEEEMEVGATYASDKSEEDNEIDSEEEVPPKVQGSRRSSRQIKKRRVISDSESDIGG
SDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVVPKRKRMVTGNGSLKKKTSRKEMP
SATKRATSISSETKSTLSAFSAPQNSESQAHVSGGCDDGSRPTVWYHETLEWLKEEKRRD
LHRRRRDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDA
LIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMA
HISKHDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLLSLKEKDDDSSGHTRVYGVCF
VDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMETKMILKGSLSSSLQEG
LIPGSQFWDAAKTLRTLLEEGYFTEKLNEDSGVMLPQVLKDMTSESDSVGLTPGEKSELA
LSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRPGAVFTKANQRMVLDAVTL
NNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMV
VPDKISEVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLS
ALEGFKVICKIIGIMEEVVDDFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEK
ARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLE
IPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNF
DKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPLILLPEEDTPPFLYLKGSRHPCI
TKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCY
VPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDELGRGT
ATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPS
QETITFLYKFIKGACPKSYGFNAARLANIPEEVIQKGHRKAREFEKMTQSLRLFREVCLA
SERSSVDAEGVHKLLTLIQEL
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcgctgaataatgcc
aacaaggccccggtcagggcctcaggggaaggtggcgctgccgccgctgccaccggggcc
tccccttcccccggcggggatgcggcctggagcgaggcggggcctgggcctgggcccttg
gcgggctccgcggcgccgcctgcggcgaggaacctcaacggagggctgcggaggtcggca
gcagctgcggtccccgccaggtcggtgggcgggggacgcgggccgaagacggaggcacgg
cggtggggcgcatgcagtcggggaagggaggctcgcctcggcactggagggtccggggcc
aggccccgggctcggaggagttcttgtgacttctcaccaggtgatttggtgtgggccaag
atggagggttacccctggtggccttgcttggtttacaaccacccttttgatggaacattc
atccgtgagaaagggaagtccgtccgagttcatgtacagttttttgatgacagcccaaca
aggggctgggttagcaaaaggctattaaaaccatatacaggttcaaaatcaaaggaagcc
cagaaaggaggtcacttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgca
gatgaagccttgaataaagacaagattaagaggcttgaattggcggtgtgtgatgagccc
tcagaaccagaggaggaggagatggaggtaggtgcaacttatgcatctgataagagtgaa
gaagataatgaaattgatagtgaagaggaagtaccacctaaagtgcaaggatctaggcga
agtagccgccaaataaagaaacgaagagtaatatcagactctgaaagcgacattggtggc
tccgatgtggaattcaagccagatgctaaggaggaaggaagcagtgatgaaataagcagt
ggagtaggggatagtgacagtgaaggcctggacagccctgtcaaagttgttccaaagcgg
aagagaatggttaccggaaatggctctctgaaaaagaaaacttcaaggaaggaaatgccc
tcagccaccaaacgagcaactagcatttcatcagaaaccaagagtactttgagtgctttc
tctgcccctcaaaattctgaatctcaagcccacgttagtggaggatgtgatgatggtagt
cgccccactgtctggtatcatgaaacattagaatggcttaaggaggaaaagagaagagat
ctgcacaggaggcgacgtgatcatcctgactttgatgcatccacactctatgtgcctgag
gattttcttaattcttgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatattttataaggtggggaagttctatgagctgtaccatatggatgcc
cttattggagtcagtgaactaggtctggtattcatgaaaggcaactgggctcattctggt
ttccctgaaattgcatttggccgatattcagattccctggtccagaagggttataaagta
gcacgtgtggaacagaccgagaccccagaaatgatggaggcaagatgccgaaagatggca
catatatctaagcatgatagagtggtgagaagggagatttgtagagtcattaccaagggt
acacagacctacagtgtgctggaaggtgatccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagatgatgattcttctggccatactcgagtgtatggtgtatgcttt
gttgacgcctcactggggaagtttttcataggtcagttttcagatgatcgccattgttcc
aggtttaggactcttgtggcacactatcctccagtgcaagtcttgtttgagaagggaaat
ctctcaatggaaactaagatgattctgaagggttcattatcctcttctcttcaggaaggt
ctgataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacagaaaagttgaatgaggacagtggagtgatgttaccccaggtgcttaaa
gatatgacctcagagtctgattctgttgggttgacaccaggagaaaagagtgaattggcc
ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaactttgaagagtatattcccttggattctgacatggtcagtgctaca
agacctggtgctgtctttactaaagccaatcagcgaatggtgctagatgctgtgacatta
aacaatttggagatttttctgaatggaacaaatggttctactgaagggacactgctggag
aagattgatacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgccatagaagacctcatggtt
gtgcctgataaaatctctgaggttgcagaccttctaaagaagcttccagaccttgagagg
ctactcagtaaaattcataatgttgggtctcccctgaagagccagaaccacccagatagc
agggctataatgtatgaagaaactacatacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtaatatgtaaaattatagggattatggaagaagttgttgat
gactttaagtctaaaattcttaagcaggtcataactctgcagacaaaaaatcctgaaggc
cgttttcctgatttgactatagaactgaatcgatgggacacagcctttgaccatgaaaag
gctcgaaggactggactgattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
agaattggctgtaggaccatagtctactgggggattgggaggaaccgttaccagttggaa
attccagagaatttcatcactcgtaatttgccagaagagtatgagttgaaatccacgaag
aagggctgtaaacgatactggactaaaactattgagaagaagttggctaatctgataaac
gctgaagaacggagagacgtatcattgaaagactgcatgcggcgactattctataacttt
gataaaaattacaaggactggcaggctgctgtagagtgcatcgcagtgttagatgtctta
ttgtgcctcgctaactatagtcgagggggtgatggacctatgtgtcgtccactgattctg
ctgccagaagaagacactcctcccttcttataccttaaaggatcacgccatccctgcatt
acgaagactttttttggagatgactttattcctaatgacattctaataggctgtgaggaa
gaagaggaggaaaatggcaaagcttactgtgtgcttgttactggaccaaatatggggggc
aagtctacactcatgagacaggctggcctattagctgtaatggcccagatgggttgttat
gtacctgctgaagtgtgtaggctcacaccaattgatagagtctttactagacttggtgcc
tcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgctagt
atacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtact
gcaacatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagaatata
aagtgtcgtacactgttttctacccactaccattcattggttgaagattattctcaaaat
gttgcagtgcgcctaggacacatggcatgtatggtagaaaatgaatgtgaagatcccagc
caggagactattaccttcctctataaattcattaagggagcttgtcctaaaagttatggc
tttaatgcagcaaggcttgcgaatattccagaggaggttattcaaaaaggacatagaaaa
gcaagagaatttgagaagatgactcagtcactgcgattatttcgggaagtttgcctggct
agtgaaaggtcatctgtagatgctgaaggtgtccataagttgctgactttgattcaggaa
ttgtag
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