Equus asinus (ass): 106826002
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Entry
106826002 CDS
T04645
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
eai
Equus asinus (ass)
Pathway
eai01524
Platinum drug resistance
eai03430
Mismatch repair
eai05200
Pathways in cancer
eai05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106826002 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106826002 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
106826002 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
106826002 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eai03400
]
106826002 (MSH2)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106826002 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
106826002
NCBI-ProteinID:
XP_014688552
UniProt:
A0A8C4L0A7
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Position
6:41103386..41178049
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEAGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRTDFNTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQTLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLRASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVTIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGICDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGESQEYDAMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITIKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcccaaggagacgctgcagctggagagcgcggccgaggccggcttcgtg
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccggggg
gacttctacacggcgcacggcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccggcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcaatacagagtt
gaagtttataagaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctttttggtaacaatgat
atgtcagcttccattggtgttgtgggtattaaaatgtctacagttgatggccaaagacag
gttggagttgggtatgttgactccatacagaggaagctgggactgtgtgagttcccggat
aatgatcagttctccaatctggaggctctcctgattcagattggaccaaaggaatgtgtt
ttacccggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagaactgactttaacacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacagatgaatagcgctgttttgccagaa
atggagaatcaggttgctgtttcatcgttgtctgcagtaatcaagtttttagaactctta
tcagatgactcaaacttcggtcagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
actggctcccagtctctggctgcattgctgaataagtgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagccgctcatggacaagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagacgcagaattgagacaaagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgctatcgactctatcagggtataaatcagctccctaatgttatacaggct
ctggaaaaatatgaagggaaacaccagacattgttgttggcagtttttgtgacgcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgatttagaaaagaagatgcagtcaacattaataagtgcagct
agagatctcggcttagatcctgggaaacagattaaactggattccagcacacaatttgga
tattactttcgtgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaagagtataccaaaaataaaactgaatatgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacgctcaacgatgtgctggct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcacctgttccgtatgtg
cgaccagtcattttggagaaaggacaaggaagaattacactgagagcatccagacatgct
tgtgttgaagttcaagatgaagttgcattcattcctaatgacgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaacgggggtgatagttctcatggcccaaattgggtgctttgtgccatgtgagtcggca
gaagtgaccattgtggactgcatcttggcccgggtgggtgctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgttagaaactgcttctattctcaggtctgcgacc
aaagattctttaataatcatagatgaactgggaagaggaacctccacctacgatggattt
gggttggcatgggctatatcagagtacattgcaaccaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcaaataccaactgttaataatcta
catgtcacagcattaactactgaagagaccttaaccatgctgtatcaggtgaagaaaggt
atctgtgatcaaagttttgggattcacgttgcagagcttgctaatttccctaggcatgta
atagagtgtgctaaacaaaaagccctggaactagaggagtttcagaatattggagagtca
caagaatatgatgcaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagagtttctatccaaggtgaagcaagtgccctttactgaaatgtca
gaagaaaacatcacgataaagttaaaacagctgaaagctgaggtgatagcaaagaataat
agttttgtaaatgaaatcatctcacgaataaaggttacggcatga
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