Equus asinus (ass): 106826321
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Entry
106826321 CDS
T04645
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain precursor
KO
K06236
collagen type I alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04151
PI3K-Akt signaling pathway
eai04510
Focal adhesion
eai04512
ECM-receptor interaction
eai04611
Platelet activation
eai04820
Cytoskeleton in muscle cells
eai04926
Relaxin signaling pathway
eai04933
AGE-RAGE signaling pathway in diabetic complications
eai04974
Protein digestion and absorption
eai05146
Amoebiasis
eai05165
Human papillomavirus infection
eai05205
Proteoglycans in cancer
eai05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106826321 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106826321 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106826321 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106826321 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
106826321 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
106826321 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
106826321 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
106826321 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
106826321 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
106826321 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
106826321 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
106826321 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eai00536
]
106826321 (COL1A1)
Glycosaminoglycan binding proteins [BR:
eai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106826321 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
106826321
NCBI-ProteinID:
NP_001310708
UniProt:
B9VR88
LinkDB
All DBs
Position
13:38811416..38828871
Genome browser
AA seq
1463 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPAVTCIQDGLRYHDRAVWKPEPCRV
CICDNGNVLCDDVICEDTKNCPGASVPKDECCPVCPEGQVSPTDDQTTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSAGISVPGPM
GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP
GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM
GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGAR
GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ
GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLP
GPPGERGGPGARGFPGADGVAGPKGPAGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLT
GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP
GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGESGKPGEQ
GVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQ
GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDK
GETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPP
GPAGPAGPPGPIGSVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPV
GKEGGKGPRGETGPAGRPGEAGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV
GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPVGPPGLAGPPGESGREGSPGAE
GSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGEAGPAGPAGPIGPV
GARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR
GPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFL
PQPPQEKSHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD
LKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKDK
RHVWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQT
GNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIID
VAPLDIGAPDQEFGIDIGPVCFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaaggccaagaagaagacatcccagcagtaacctgc
atacaggacggcctcaggtaccacgaccgagccgtatggaaacccgagccctgccgggtc
tgtatctgcgacaatggcaacgtgttgtgcgatgacgtgatctgcgaagacaccaagaac
tgtcctggagcctcggtccccaaggacgagtgctgccccgtctgccccgaaggccaggtg
tcacctacagacgaccaaaccacaggagtcgagggacccaaaggagacactggtccccga
ggcccaaggggacccgcaggcccccctggccgagatggcatccccggacagcctggactc
cccggcccccccgggcctcctggacctcccggaccccctggcctcggaggaaactttgct
ccccagttgtcttatggctatgatgagaaatctgctggaatttccgtgcctggccccatg
ggtccttctggtcctcgtggtctccctggcccccctggcgcgcccggtccccaaggtttc
caaggcccccctggtgagcctggcgagcctggagcctcaggtcccatgggtccccgcggt
ccccctggcccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcct
ggtgagcgtgggcctcctggacctcagggtgctcggggattgcctggaacagctggcctc
cctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggt
cctgctggccccaagggtgagcctggtagccctggtgaaaatggagctcctggccagatg
ggtccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgct
cgtggaaatgatggtgctactggtgctgctggaccacctggtcccactggccccgctggt
cctcctggtttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccga
ggctctgaaggtccccagggtgtgcgtggtgagcctggcccccccggccccgctggtgct
gctggccccgctggaaaccctggtgctgatggacagcctggtgctaagggtgccaatggc
gctcctggtattgctggtgctcctggcttccctggtgcccgaggcccctctggaccccag
ggccccagtggcccccctggtcccaagggtaacagcggtgaacctggtgctcccggcaac
aaaggagacaccggtgccaagggagagcccggccccactggtattcaaggcccccctggc
cctgctggggaagaaggaaagcgaggagcccgaggtgaacctggacccactggcctgccc
ggaccccctggcgagcgtggtggacctggtgcccgtggcttccctggagcagatggtgtt
gctggtcccaagggtcccgctggtgaacgtggtgctcctggccctgctggtcccaaaggt
tctcctggtgaagctggtcgccccggtgaagccggtctgcctggtgccaagggtctgact
ggaagccctggcagccctggtcctgatggcaaaactgggccccctggtcccgctggtcaa
gatggtcgccccggacctccaggtccccctggtgcccgtggtcaggctggtgtgatggga
ttccctggacctaaaggtgctgctggagagcctggcaaagctggagaacgaggtgttccc
ggaccccccggtgctgtgggccctgctggcaaagatggagaagctggagctcagggaccc
cccggccctgctggccccgctggtgagagaggtgaacaaggtcctgctggctccccagga
ttccagggtctccctggccccgctggtcctcctggtgaatcaggcaaacctggtgaacag
ggtgttcctggagaccttggtgcccctggcccctctggagcaagaggagagagaggtttc
cccggtgagcgtggtgtgcaaggtccccccggtcctgcaggtccccgtgggtccaacggt
gcccctggcaacgatggtgctaagggtgatgctggtgcccctggagctcccggtagccag
ggtgcccctggccttcagggaatgcctggtgaacgaggtgcagctggtcttccaggccct
aagggtgacagaggcgatgctggtcccaaaggtgctgatggttctcctggcaaagatggc
gtccgtggtctgactggccccatcggtcctcctggccccgctggtgcccctggcgacaag
ggtgaaactggtcctagcggtcctgctggtcccactggagctcgtggtgcccccggagac
cgtggtgagcctggtcctcccggccctgctggctttgctggcccccctggtgctgatggc
caacctggtgctaaaggcgaacccggtgatgctggtgctaaaggcgatgctggtccccct
ggccctgctggacccgccggaccccctggccccattggtagcgttggtgctcctggaccc
aaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgctggc
cgagtcggtccccccggcccctctggaaatgctggaccccctggccctcctggccctgtt
ggcaaagaaggcggcaaaggcccccgtggtgagactggccccgctggacgtcctggtgag
gccggtccccctgggccccctggccccgctggcgagaagggatctcctggtgctgatgga
cctgctggtgctcccggcactcctgggcctcagggcattgctggacagcgtggtgtggtc
ggtctgcccggtcagcgaggagaaagaggcttccctggtcttcccggcccctctggtgaa
cccggtaagcaaggtccttctggagcaagtggtgaacgtggcccccctggtcccgtgggc
ccccctggattggctggaccccctggcgagtctggacgtgaaggatcccctggtgctgaa
ggctcccccggacgagacggttctcctggccccaagggtgaccgtggtgagactggccct
gctggaccccctggtgctcctggtgcccctggtgcccctggccccgttggccctgctggc
aagagtggcgatcgtggtgaggctggtcctgctggtcctgctggtcccatcggccccgtt
ggtgcccgtggtcctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaa
cagggcgacagaggcattaagggtcaccgtggcttctctggtctccagggtccccctggt
cctcccggctctcctggtgaacaaggtccctctggagcttctggtcctgctggtccccgc
ggtccccctggctctgctggtgctcctggcaaagatggactcaacggtctcccaggcccc
atcggcccccctggtcctcgtggtcgcactggtgatgctggtcctgttggtccccccggc
cctcctggaccccctggtccccctggtcctcccagcgccggtttcgacttcagcttcttg
cctcagccacctcaagagaagtctcacgatggcggccgctactaccgggccgatgatgcc
aatgtggtccgtgaccgtgacctcgaggtggacaccactctcaagagcctgagccagcag
atcgagaacatccggagtcccgaaggcagccgcaagaacccagcccgtacctgccgtgac
ctcaagatgtgccactctgactggaagagcggagaatactggattgaccccaaccaaggc
tgcaacctggacgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtac
cccactcagccccaagtggcccagaagaactggtacatcagcaagaaccccaaggacaag
aggcacgtctggtacggcgaaagcatgaccgacggattccagttcgagtatggtggccag
ggctccgatcctgccgatgtggccatccagctgactttcctgcgcctgatgtccaccgag
gcctcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagact
ggcaacctcaagaaggccctgctcctccagggctccaacgagatcgagatccgggccgag
ggcaacagccgcttcacctacagcgtcacctacgatggctgcacgagtcacaccggagcc
tggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgat
gtggctcccttggatattggcgccccagaccaggaattcggcatcgacattggccctgtc
tgcttcctgtaa
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