Equus asinus (ass): 106826950
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Entry
106826950 CDS
T04645
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
eai
Equus asinus (ass)
Pathway
eai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106826950 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eai03032
]
106826950 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
eai03400
]
106826950 (TOPBP1)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
106826950 (TOPBP1)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
106826950 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
106826950
NCBI-ProteinID:
XP_044611074
UniProt:
A0A8C4L4S9
LinkDB
All DBs
Position
21:27574319..27635739
Genome browser
AA seq
1515 aa
AA seq
DB search
MSRNEKEPFLVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIRENDRSLYIC
DPFSGIVFDHLRKLGCRIVGPQVVIFCMQHQRCVPRAEHPVYNMVMSDVTVSCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWVKTLWEKSQ
EKKIARYTDINVEDFKCPVFLGCIICVTGLCGLERKAVQQLTIKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTKWFFDSVEKGFCQDESIYRTEPRPETKAMPDTSTPT
GQITTGDGRTLSDVSHISNINASCINESICNSVLNSKVEPTLENLENLDISAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFNKGYMLPEEPYIHANYQPVEIPVSDPPESKTALLKKNSSFSKKDFAPV
EKHEQADEDLLSQYVINNPTIVEAAKSQVGPFNDSTHISLQEENQSSVSHCLPDTSTVTE
EGLFSQKSFLVLGFSSENEANIANIIRENAGKTVSLQSRIVADYAVVPLLGCEVEATVGE
VVTNTWLVTCIDYQTLIDPKSNPLFMPVPVMAGVTPLVDCVISFSQCVGAEKDSLTFLAN
HLGASVQEFFVRKSNAKKGMLASTHLVLKEPGGSKYEASKKWNLPAVTIAWLLETARMGK
KANESHFLIENSPKEEQSLETEIVNGVNLNPDTPEQPATHVDTHRKTAVTPLDMNRFQSK
AFHAVISQHTGQRSVSPAVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
RGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKDAQAEKEREEALKPLHK
VVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVH
IVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSADSTIKDDEPD
HLPIEENDIDNMTTSDKESATANGNGRNDSKGALTQTLEMRENFQKQLQEIMSATSIVKP
QVQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIWDD
PTAREERARLASNLQWPSCPTQYSEPQVDIKKVEDSPFREPLHDSEIAEQALCGPGNICV
PEAPKHSTCDELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPKAQIITIEETHEDLKKQ
YIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLASVAAGKW
VLHRSYLEACRTAGHFMPEEDYEWGSSCILDVLTGISVQQRRLALAAMRWRRKIQQRQES
GIIEGAFSGWKVILHVDPSREAGFKRLLQSGGAKVLPGHSIPLFKEATHLFSDLNKLKPD
DSGVNIAEAAAHNVYCLKTEYIADYLMQESPPQVENYCLPEAISFLQNNKEPGPGLSQKR
KAPAEKNKIKRPRVH
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgagaaagaaccgtttttggtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaggcattgaagataagggagaatgatcgatcactttatatctgt
gacccttttagtggcattgtctttgatcacctcagaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcagcaccagcgatgtgttccaagagccgaacatcca
gtttataatatggttatgtctgatgtaaccgtatcttgtacaagcctggaaaaagagaaa
agagaagaagttcataaatatgtacaaatgatgggcggacgcgtatacagagaccttaat
gtatcagtcactcaccttattgcaggagaagttggcagcaagaaatatttagttgctgcg
aacctgaagaaacctattttgcttccttcctgggtaaaaacactttgggagaagtcccag
gagaagaaaatagctagatacactgatataaacgtggaagacttcaagtgtcctgtcttt
cttggttgtataatctgtgtgactggcttgtgtggcttagagaggaaggcagttcagcaa
ctcacgattaagcatggaggtcaatacatggggcagttgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccgaaaggtcaaaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccacgaaatggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatacaggacagaacctagaccagaaacaaaggctatgcctgatacttcaactcctact
ggccagatcactacaggtgacggtcgtactctttcagatgtcagccatatttccaacatc
aatgcaagttgcataaatgaatcaatatgtaattcagttcttaatagtaaagtggagcct
acacttgaaaatctagaaaatctggacatcagtgcatttcaggcacctgaagatttatta
gatggttgtcggatatatctctgcggttttagtggcagaaagctagataaactgagaagg
cttattaacagtggaggcggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgacgatgaattgaagcagttttgggataaatcagcccacaggcct
catgtagtgggagcaaaatggttgctagagtgttttaataaaggttatatgcttcctgaa
gagccatatatccacgccaactaccagccagtggaaattccagtgtcagatccacctgaa
agtaaaacagcccttttaaaaaagaacagcagcttctctaagaaagactttgctcctgtt
gaaaagcatgaacaagctgatgaagatctgctctctcaatatgtaattaataacccaaca
atagttgaagctgcaaagtctcaagttgggccctttaatgattctactcatatatctctt
caagaagaaaaccagtcttctgtcagtcattgcctccctgacacttctacagttactgaa
gaaggtttattcagccaaaagagtttccttgttctgggttttagtagtgaaaatgaagct
aatattgcaaatatcatcagagaaaatgctggaaaaactgtgtcccttcagagcagaatt
gttgctgattacgctgtggttcctctgctggggtgtgaagtggaagcaactgtgggagaa
gttgttacaaatacgtggctggtaacttgtatagactatcagactttaattgatccaaag
tcaaatcctctcttcatgccagtcccagtaatggcaggagtgactcctttagtggattgt
gttatttcgttcagccagtgtgtgggagcagaaaaagattcattgacattcttagcaaat
caccttggagcaagtgttcaagaattctttgttcgcaaatccaatgcaaagaaaggtatg
cttgccagtacacatcttgtattgaaagaaccaggtggttctaaatacgaagcttccaag
aagtggaatttaccagcagtcactatagcttggctcttggagaccgctagaatgggaaag
aaagcaaatgaaagccattttctgattgaaaattcacctaaagaagaacaaagtttggaa
actgaaatagtaaatggggtgaatctaaatccagatactccagagcagcctgccacacac
gtggacacgcacaggaaaacagctgttacccccttagatatgaaccgcttccagagtaag
gcgttccatgctgtgatctcccagcacaccgggcagcgctcagtttccccagcagtgggc
cagccgctccagaaggagccctctttacacctggacacgccatcaaaatttctgtccaag
gacaaactcttcaagccttcctttgatgtcaaggatgcacttgcagccttggaaactcca
agaggtcccagccaacagaagaggaagctgagcacaccactctcagaagtcattgtcaga
aacttgaaacttgctttggcaaatagctctcgaaatgctgttgctctttctgccagccct
cagctgaaggatgcccaagcagagaaggaacgggaagaagccctgaagccacttcacaag
gtagtggtgtgtgttagtaaaaaactcagtaagaagcagagtgaactcaatgggatcgca
gcctctctaggagcagattacaggtggagtttcgatgaaacagtgactcatttcatctat
caggggcgaccaaacgacactaatcgagagtataaatctgtaaaagaaagaggagtacac
attgtttcagagcactggcttttagaatgtgcccaggagtataaacatcttcctgaatct
ctttatccacatacttataatcccaaaatgagcttggatatcagtgcagtgcaagatggc
agactctgtaacagtcggctactctcagctgattctacaataaaggatgatgagccagat
catttacctatagaagaaaatgatatagacaatatgaccaccagtgataaagaatcagca
acagcaaatggaaatggaaggaatgactctaaaggagctctgacacagaccttggagatg
agagagaacttccagaagcagctgcaggagataatgtctgcaacatcaatagtgaaaccg
caagtgcagaggacttctctttccagaagtggttgtaacagcgcttcttcaacccctgac
agcactcgctctgcccgcagtggacgaagtagagtcctggaggccctgaggcagtctcgt
cagacagtacctgatgtcaacacagagccctcccaaaatgaacagatcatttgggatgac
cctacagccagggaggagagagcaaggcttgccagcaatctgcagtggcccagttgtccc
acacaatactctgagcctcaggttgacattaaaaaagtggaggattctcctttccgggag
cctttacatgactcagaaattgctgaacaggctctctgtggtcctggaaacatatgtgtg
cctgaagccccaaagcactcgacctgtgatgaactggaaactccaataaaagacagccac
ctgatccctacgcctcaagcccccagtattgccttccccctggccaacccgcctgtggcc
ccacaccctaaagcacagattataacaatagaagagacccatgaagacttaaaaaaacag
tacatatttcagttgtcatctctgaatcctcaagaacgtattgattactgtcatctgatt
gaaaaactaggtggattagtgatagagaagcagtgctttgatcccaactgcacacacatt
gttgtgggacatccacttcgaaacgagaagtacttagcctcagtggcagctggcaagtgg
gtgcttcatcgctcctaccttgaagcatgcaggacagctgggcacttcatgccggaagaa
gactatgaatggggaagtagttgcatacttgacgttttgactggaatcagtgtacagcag
cgaagactagcacttgcagcaatgagatggaggagaaaaatccaacaaagacaagaatcg
ggcattattgagggggcatttagtgggtggaaggtaatcttacatgttgatccatcccga
gaagcaggattcaaacgccttcttcagtcaggaggagcaaaggtgctacctggtcattct
atacctttatttaaagaagccacacatctcttctctgacttaaataaactcaaaccagat
gactcaggagttaatatagcggaagctgctgcccataatgtgtactgcttgaaaacggaa
tatattgctgattatcttatgcaggaatcccctcctcaagtagaaaattactgtctacca
gaagctatttcatttcttcaaaataataaggaacctgggcctggattatcacaaaagagg
aaagctcctgcagagaaaaataaaatcaaacgacctagagtacactga
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integrated database retrieval system
