KEGG   Equus asinus (ass): 106827379
Entry
106827379         CDS       T04645                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
eai  Equus asinus (ass)
Pathway
eai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106827379 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eai03041]
    106827379 (PRPF38B)
Spliceosome [BR:eai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106827379 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106827379 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 106827379
NCBI-ProteinID: XP_014690672
UniProt: A0A9L0IZL5
LinkDB
Position
16:complement(10143616..10152593)
AA seq 546 aa
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPVVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKEGKEGAEEIDRHIERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKDSK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNENKEKANKRSRSGSQGRTD
SAEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQLK
NKDETV
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggctaacaacagccccgcgctgacaggcaactcacagccgcagcaccaggcggccgcg
gcggcggcccagcagcagcagcagtgcggcggcggcggcgccaccaagccggtggtgtcg
ggcaagcagggcaatgtgctgccgctgtggggcaacgaaaagactatgaacctcaacccc
atgattttgaccaacatcctgtcgtcgccttacttcaaagtgcagctctacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgaaccatgggag
aaaggaagcaggaaaacagcgggccagacagggatgtgcggaggggttcgaggtgttgga
acaggaggaattgtttctacggcattttgcctgttatataaattatttactctgaagtta
actcgcaagcaagtgatgggtctcataacacacacagactctccatatattagagctctt
ggatttatgtatataaggtacacgcagccccctacagatctatgggactggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctgcggtcttttctgacaaaactggagtggttttctaccttgtttccaaga
attcctgttccagttcagaagaacatcgatcaacagattaaaactcggcctagaaaaatc
aagaaagaggggaaggaaggtgcagaggaaatagatagacatattgaacgcagacgttct
aggtctccaaggagatcactgagtccacggaggtccccaagaagatcaagaagtagaagc
catcatcgggagggtcatggatcttctagttttgaccgagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcccgaagt
atcgatcggggcttagaacgcaggcgtagcaggagtagggaaaggcatagaagtcggagt
cggagtcgtgataggaaaggggatagaagggacagggatcgggaaagagagaaagagaat
gagagaggcagaagacgagatcgtgactatgataaggaaaggggtaatgaccgggaaaag
gagagagagcgatcaagagaacggtccaaggaacggagaagtaggggtgaggtagaagaa
aagaaacataaagaggacaaagatgacaggcggcatagagatgacaaaaaagattccaag
aaagagaaaaaacacagtagaagtagaagcagagaaaggaagcacagaagtaggagtaga
agtagaaacgcggggaaacgcagtcggagcaggagcaaagagaaatcaagtaaacataaa
aacgaaaacaaagagaaagcaaacaagcgaagtagaagtggcagtcaaggaagaactgac
agtgctgagaaatcgagaaaacgggaacacagccccagcaaagaaaaatctaggaagcgt
agcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccagtctgac
aaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaacaacttaaa
aacaaagacgagactgtgtga

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