Equus asinus (ass): 106827379
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Entry
106827379 CDS
T04645
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
eai
Equus asinus (ass)
Pathway
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106827379 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106827379 (PRPF38B)
Spliceosome [BR:
eai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106827379 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
106827379 (PRPF38B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
106827379
NCBI-ProteinID:
XP_014690672
UniProt:
A0A9L0IZL5
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Position
16:complement(10143616..10152593)
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AA seq
546 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPVVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKEGKEGAEEIDRHIERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKDSK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNENKEKANKRSRSGSQGRTD
SAEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQLK
NKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcacagccgcagcaccaggcggccgcg
gcggcggcccagcagcagcagcagtgcggcggcggcggcgccaccaagccggtggtgtcg
ggcaagcagggcaatgtgctgccgctgtggggcaacgaaaagactatgaacctcaacccc
atgattttgaccaacatcctgtcgtcgccttacttcaaagtgcagctctacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgaaccatgggag
aaaggaagcaggaaaacagcgggccagacagggatgtgcggaggggttcgaggtgttgga
acaggaggaattgtttctacggcattttgcctgttatataaattatttactctgaagtta
actcgcaagcaagtgatgggtctcataacacacacagactctccatatattagagctctt
ggatttatgtatataaggtacacgcagccccctacagatctatgggactggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctgcggtcttttctgacaaaactggagtggttttctaccttgtttccaaga
attcctgttccagttcagaagaacatcgatcaacagattaaaactcggcctagaaaaatc
aagaaagaggggaaggaaggtgcagaggaaatagatagacatattgaacgcagacgttct
aggtctccaaggagatcactgagtccacggaggtccccaagaagatcaagaagtagaagc
catcatcgggagggtcatggatcttctagttttgaccgagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcgaagatcccgaagt
atcgatcggggcttagaacgcaggcgtagcaggagtagggaaaggcatagaagtcggagt
cggagtcgtgataggaaaggggatagaagggacagggatcgggaaagagagaaagagaat
gagagaggcagaagacgagatcgtgactatgataaggaaaggggtaatgaccgggaaaag
gagagagagcgatcaagagaacggtccaaggaacggagaagtaggggtgaggtagaagaa
aagaaacataaagaggacaaagatgacaggcggcatagagatgacaaaaaagattccaag
aaagagaaaaaacacagtagaagtagaagcagagaaaggaagcacagaagtaggagtaga
agtagaaacgcggggaaacgcagtcggagcaggagcaaagagaaatcaagtaaacataaa
aacgaaaacaaagagaaagcaaacaagcgaagtagaagtggcagtcaaggaagaactgac
agtgctgagaaatcgagaaaacgggaacacagccccagcaaagaaaaatctaggaagcgt
agcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccagtctgac
aaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaacaacttaaa
aacaaagacgagactgtgtga
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