Equus asinus (ass): 106827681
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Entry
106827681 CDS
T04645
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106827681 (PRPF39)
Spliceosome [BR:
eai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106827681 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
106827681
NCBI-ProteinID:
XP_014691154
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All DBs
Position
2:225743798..225781815
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AA seq
667 aa
AA seq
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MQSSPMDEYRSSRNGSTGSSSEVVVEQAADFGPEIMNVTEMEQSPDGSPNVNATTEENEI
ANAVDLPVTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSTEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagttctcccatggatgagtacagaagttcgcgtaatggcagcacaggcagcagt
tcagaggtagtggtagaacaggctgctgatttcggtcctgagattatgaatgttacggaa
atggaacagtcacctgatggatctcctaatgtgaacgcaaccacagaagaaaatgaaata
gcaaatgctgtggaccttccagtgacagaaacggaagcaaatttccctccagaatatgaa
aaattttggaaaactgtagaaaataatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacat
gacaacattaaacaatcagatgaggtgtatcggcgggggcttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaacgttggaccctggtgatcct
gagacaaacagtacaataagaggaacttttgagcatgctgttctggctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaattgggaaaatgaacagggaaacctg
agagaagttacagcaatatatgatcgtattcttggaattccaacacagctttatagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttctaactggt
gaacagtttattcagctgcgaagggagttagcttctgtaaatggacatagtggagatgat
ggtcctcctggtgatgacctgccgtcgggaattgaagacataactgatccagcaaagcta
attactgaaatagaaaacatgagacatagaatcattgaaatccatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactgaaaaactggaaggaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgcgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcact
gaaggagtgaggcatgtcttcagcagagcttgcactattcatctcccaaagaaacccatg
gtgcacatgctgtgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgcgaacgtttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaggacgccatt
aagaatgccaaatcaaataacgagtcatcgttttatgctatcaaactagcccgacatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaattgaacga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctgaattgttttgacaaagctgtgcatggttcattacct
attaaaatgagaatcacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaatgcctatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagcacacaca
gaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattatcctcctcctccaacctga
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