Equus asinus (ass): 106828335
Help
Entry
106828335 CDS
T04645
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eai03400
]
106828335 (APLF)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
106828335 (APLF)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106828335 (APLF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
Yop-YscD_cpl
FHA
DUF2141
HUN
Motif
Other DBs
NCBI-GeneID:
106828335
NCBI-ProteinID:
XP_014692233
UniProt:
A0A9L0JFZ2
LinkDB
All DBs
Position
6:58957035..59082956
Genome browser
AA seq
511 aa
AA seq
DB search
MSGGFELQPQDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVADGQLRIKPIHTN
PCFCLSTEKSQFLPLEINLWHQLNPGDSFSLLVDKYIFRVFSTHSEMEMKCTLRNSQMLD
EDNVLNETPKSSSINLPDETAGAPQLERSTEVAKTQTATAKSVSFPGECRDVSKQQSNPA
QRKRILPAWMLTDLRDQNLSAPVLTGDNIVTQRSGKEGICKDKTQVNITQQGKKRLISSG
SSESTSAEQDTGKKCKNADQEESVISSKGMPQSFSAITVSNAEVNDTKTDTQRNKIPIEE
LGKVSEHNIITEGTPNKEDEAVSCSESCSRAQGKSFHDEAQGSHPESSSDPSNPGTSRAK
ATDSVPQASEENKVKRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVQVMCQDEADDRPE
CPYGASCYRKNPQHKIEYRHGTLSMRSISGEDDDVGQPNEYDLNDSFLDDEEEEYEPTDE
DSDWEPEKEDQEKEDTEELLKEAKKFMKRKK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggggcttcgagctgcagccgcaggacggcggcccccgggtggccctggcgccc
ggggagacggtgatcggccgcgggccgctgctgggaataacagataagagagtatccaga
agacatgccattcttgaggtggcagatggtcagcttcgaatcaaaccgatacacacaaat
ccatgtttttgtctgtctactgagaagagccagttcttaccattagagataaatctgtgg
caccagttgaatcctggagatagtttttcgttgttagtcgacaaatatattttccgtgtt
ttctctacacactctgaaatggaaatgaagtgtactttaagaaacagtcaaatgcttgat
gaagataatgtattgaatgaaacaccaaaatcttcctcaattaatttgcctgatgagaca
gctggtgccccacagctggaaagaagcacagaagtagctaagacccagactgctactgcg
aagagtgtgtctttcccaggtgaatgtagagacgtcagtaagcagcagtcaaaccctgcc
cagaggaaaagaatccttcccgcatggatgttaacagatctaagagatcaaaacctttca
gcaccagtcctcactggagataatattgtaacccagagaagtggaaaagaaggaatctgc
aaagataaaacccaagttaacataacacagcaaggaaaaaagcgattaatttcatcagga
agctcagaaagtacatcagcagagcaagacacaggaaaaaagtgcaaaaatgctgatcag
gaagagtctgtcatttcatccaagggaatgccacaatcattttctgcaatcacagtaagt
aacgcggaggtgaatgatacgaagactgatacacagagaaacaaaatcccaatagaggaa
cttggtaaggtttctgaacataacatcatcactgaagggacaccaaataaagaagacgaa
gcagtgagttgttctgagagttgttcaagggcccaaggcaagtcgttccatgatgaggct
caaggatctcaccctgagtccagctctgatccttccaatcctggaacttcacgtgcaaag
gcaactgattccgttccacaagcttctgaagaaaacaaggtcaagaggacatcctgcatg
tatggggcaaactgctacaggaagaatcctgtccattttcaacacttcagtcaccctggt
gatagtgattatggaggtgtacaagtcatgtgtcaagatgaggcagatgaccggcctgaa
tgtccctatggagcatcttgctataggaagaacccccagcacaagatagaatatagacat
ggtacactttcaatgagaagcatttcaggtgaagatgatgatgttgggcagcctaacgag
tacgacctgaatgacagctttctagatgatgaggaagaagaatatgagccaacagatgaa
gattctgactgggaaccagaaaaggaagaccaagagaaggaagatacggaagagcttttg
aaagaagcaaaaaaatttatgaaaagaaaaaagtaa
DBGET
integrated database retrieval system
