Equus asinus (ass): 106828466
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Entry
106828466 CDS
T04645
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106828466 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106828466 (SMG5)
03032 DNA replication proteins [BR:
eai03032
]
106828466 (SMG5)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106828466 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
106828466 (SMG5)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106828466 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
106828466
NCBI-ProteinID:
XP_014692464
UniProt:
A0A9L0IN95
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All DBs
Position
25:7415024..7447585
Genome browser
AA seq
1016 aa
AA seq
DB search
MSQGPTTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYDSGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDE
PESKEPLEKEEEPGPEPPPAAPQAGEVRKSRKISRLSCLRRRRHPPKAGDDSDLSEGFES
DSSHDSARASEGSDTGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDDEGTRSPALE
HPRARSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTEPHA
LASHKPCINGDVEKPSEPASEEGSESEGSESSGRSCRNERSIQEKLQVLMAEGLLPAVKV
FLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQETGLALCPEVQDLLEGCELP
DLPSSLLLPEDMALRNLPPLRAAHRRFNFDTDRPLLSTLEESVVRICCIRSFGHFIARLQ
GSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRWQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQG
AGEEDPSGMVTIITGLPLDNPSALSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggccccaccacaggggagagcagcgagcccgaagcaaaggtcctccacact
aagcggctttaccgggctgtagtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaactgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccggtggactatgggaggaaggctgaggag
ctgctatggagaaaggtatactacgaagttatccagcttatcaagactaacaaaaagcat
atccacagccgaagcaccttggaatgtgcctacagaacacacctggttgctggtattggc
ttctaccagcatctccttctctatatccagtcccactaccagctcgaactgcaatgctgc
atcgactggacccacgtcacggaccccctcataggatgcaagaagccagtgtctgcctca
gggaaggaaatggattgggcacagatggcatgccaccgatgtctagtgtacctgggggac
ttgtcacgatatcagaatgaattagctggcgtagacaccgagctgctagctgagagattt
tactaccaagccctgtcagtagctccccagatcggaatgcccttcaaccagctgggcacc
cttgcaggcagcaagtactataatgtggaagccatgtattgctacctgcgctgcatccag
tcagaagtgtcctttgagggggcctatgggaacctcaagcggctctatgacaaggcagcc
aaaatgtaccaccagctgaagaagtgtgagactcggaaactctctcccagcaagaagcga
tgtaaagacattaagaggttgctggtgaactttatgtatctgcaaagcctcctgcagccc
aaaagcagctccgtggactcagagctgacatcactttgccagtcagtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaagagtatgacagtggatatgctttcctcccggatcttctcatcttccagatggtcatc
atctgccttatgggtgtgcacagcttgaaaagagcaggatccaagcagtacagtgcagcc
attgccttcaccctggccctcttctcccatctcgtcaatcatgtcaacatacggctgcag
gctgagctggaagaaggcgagaatcctgttccagcattccagagcgatggcacagatgaa
ccagagtccaaggaacccctggagaaggaggaggagcctggtcctgagcctcctcctgca
gcacctcaagcaggcgaggtcagaaagagccggaagatctcccgtctctcctgcctccgc
cgccgccgtcatccccccaaagctggtgatgacagtgacctgagcgaaggctttgaatca
gactcaagccatgactcagcccgggccagcgagggctcagacactggctctgacaagagt
cttgaagggggaggaaccgcctttgatgctgagacagactcagaaatgaacagccaagag
tcccgatcagacctggaagatatggaggatgacgaagggacacggtccccagccttggaa
caccctcgggccaggtcagaggcccctgaatccctcaatggtccactgggccccagtgag
gctagtattgccagcaatctacaagccatgtccacccagatgttccagaccaagcgctgt
ttccgactggcccccaccttcagcaacctgctcctccagcccaccaccgaacctcacgcc
ttggccagccacaagccctgtatcaatggggatgtggagaagccctcagagccagcttct
gaagaaggctctgagtcggaggggagtgagtccagtgggcgctcctgtcggaatgagcgc
agcatccaagagaagctgcaggtcctgatggccgaaggcctgcttcctgccgtgaaagtc
ttcctggactggctgcggaccaaccctgacctcatcatcgtgtgtgcacagagctctcaa
agtctgtggaaccgcctgtctgtgttgctgaatctgttgccagctgctggcgaacttcaa
gagactggcctggccctgtgtcccgaggttcaggatcttcttgaaggttgtgaactgcct
gacctcccctctagcctgctgctcccagaggacatggcacttcgtaacctgcctcccctc
cgggctgcccacagacgttttaactttgacacggatcggcccttgctgagcaccttagag
gagtcagtcgtgcgcatctgctgcatccgcagctttggccacttcattgcccgcctgcaa
ggcagcatccttcagttcaatccggaggtcggcatcttcgtcagcatcgcccagtctgag
caggagagcctgctgcagcaggcccaggcacagttccgcatggcacaggaagaagcccgg
cgaaacagactaatgagagacatggcccagctacgacttcagctggaggtctctcagctg
gaagggagcctgcagcagcccaaggcccagtcagcaatgtctccctacctcgtccctgac
acccaggccctctgccaccacctccctgtcatccgccagctggccaccagtggccgcttc
attgtgatcatcccaaggacagtgatcgatggcctggatttgctgaagaaggaacaccca
ggggcccgggatgggatccgatacctagaggcagagtttaaaaaaggaaacaggtacatt
cgctggcagaaagaggtgggaaagagctttgagcggcataagctgaagagacaggatgca
gatgcctggactctctataagatcctggacagctgcaaacaactgactctggcacagggg
gcaggtgaggaggatccaagtggcatggtgaccatcatcacaggccttccgctggacaac
cccagtgcgctctcaggccctatgcaggcagccctgcaggccgctgcacacgccagtgtg
gacatcaagaatgttctggacttctacaagcagtggaaggagattggttga
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