KEGG   Equus asinus (ass): 106829274
Entry
106829274         CDS       T04645                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
eai  Equus asinus (ass)
Pathway
eai03020  RNA polymerase
eai03420  Nucleotide excision repair
eai05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:eai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106829274 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106829274 (POLR2I)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    106829274 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eai03021]
    106829274 (POLR2I)
   03400 DNA repair and recombination proteins [BR:eai03400]
    106829274 (POLR2I)
Transcription machinery [BR:eai03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106829274 (POLR2I)
DNA repair and recombination proteins [BR:eai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106829274 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 106829274
NCBI-ProteinID: XP_014693799
UniProt: A0A8C4KVU3
LinkDB
Position
26:complement(7386437..7388071)
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggagccggatgggacctacgagcctggcttcgtgggtattcgattctgccaggaatgt
aacaacatgctctaccccaaggaggacaaggagaaccgcattctgctctacgcgtgccgg
aattgtgattaccagcaagaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgaactgacccagatcatcgctgacgtgtcccaggaccccacgttgccgcgg
accgaagaccacccgtgccaaaagtgcggccacaaggaggcagtgttcttccagtcgcac
agcgccagggccgaggacgccatgcgcttgtactacgtgtgcacggccccacactgcggc
caccgctggaccgagtga

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