Equus asinus (ass): 106829295
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Entry
106829295 CDS
T04645
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
eai
Equus asinus (ass)
Pathway
eai04390
Hippo signaling pathway
eai04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
106829295 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
106829295 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106829295 (SOX2)
Transcription factors [BR:
eai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106829295 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106829295
NCBI-ProteinID:
XP_014693818
UniProt:
A0A9L0JBP1
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All DBs
Position
5:72497614..72500587
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AA seq
323 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMM
QDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPG
MALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHM
SQHYQSGPVPGTAINGTLPLSHM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccag
aagaacagcccggaccgcgtcaagcggcccatgaacgctttcatggtgtggtcccgcggg
cagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgc
ctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggcc
aagcggctgcgagcgctgcacatgaaggagcacccggattataaataccgtcctcggcgg
aaaaccaagacgctcatgaagaaggataagtacacgctgcctggcgggctgctggccccg
ggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaac
cagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatg
caggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgcgcagatg
cagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcag
acctacatgaacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggc
atggcgcttggctccatgggttcggtggtcaagtccgaggccagctccagcccccccgtg
gttacctcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatc
agcatgtacctccccggcgccgaggtgccggaacccgccgcccccagcagacttcacatg
tcccagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctc
tcgcacatgtga
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