Equus asinus (ass): 106829394
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Entry
106829394 CDS
T04645
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
eai
Equus asinus (ass)
Pathway
eai03018
RNA degradation
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106829394 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
106829394 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106829394 (LSM8)
03041 Spliceosome [BR:
eai03041
]
106829394 (LSM8)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106829394 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
106829394 (LSM8)
Spliceosome [BR:
eai03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106829394 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
106829394
NCBI-ProteinID:
XP_014693969
UniProt:
A0A9L0K3J5
LinkDB
All DBs
Position
1
Genome browser
AA seq
154 aa
AA seq
DB search
MRFGRFHLASDWRKLRCGNSRDICCRQSAGAAAGYPRGFLPPVTAGAAVSPGASGPSIMT
SALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIV
RGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttggcaggtttcatttagcctctgactggcggaagctaagatgcggtaactct
cgcgatatttgctgccgccagtcggcgggagctgctgccggttacccgcgaggcttttta
cctccagttactgccggcgctgctgtgtcgcccggagcgtccggcccgagcatcatgacg
tctgccctggaaaactatatcaaccgaactgttgctgttattacttctgatgggagaatg
atagtgggaacactgaaaggttttgaccagaccattaatttaattttggatgaaagccac
gaacgagtattcagctcttcgcaaggagtagagcaagtggtactagggttatacattgta
agaggtgacaacgttgcagtcattggagaaattgatgaagagacagactctgcgcttgat
ttggggaatattcgagcagaacctctaaactctgtagcacactga
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