Equus asinus (ass): 106829908
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Entry
106829908 CDS
T04645
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X5
KO
K12879
THO complex subunit 2
Organism
eai
Equus asinus (ass)
Pathway
eai03013
Nucleocytoplasmic transport
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106829908 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
106829908 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106829908 (THOC2)
03041 Spliceosome [BR:
eai03041
]
106829908 (THOC2)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106829908 (THOC2)
Spliceosome [BR:
eai03041
]
Complex C
Other components
EJC/TREX
106829908 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106829908 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106829908
NCBI-ProteinID:
XP_014694696
LinkDB
All DBs
Position
X:complement(65070862..65171510)
Genome browser
AA seq
1624 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTNRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSALGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNG
NSGSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSK
ENVKGGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKVTAILPKVPLG
SENYASSPVISIHFLQDSLIELKESSAKLYLNHTPLPLSKSKEREMDKKDLDKSRERSRE
REKKDEKDRKERKRDHSNSDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNEKDKE
KNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaccgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggattctcagtgaaaataaaagccatgatagttca
actaatagagatttccagcaagctctgtatgaattgtcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgacgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattaggacttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattacaagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttgttagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtgcatcttcttccagctgataactgcattatggatgaacacaaa
cgagaaattgtggaagctaaacaaattgttagaaaacttacaatggttgtattgtcttct
gaaaaaatcgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccgtactatgcagcttcacataagctaatagcc
cttgctatctgcaagctcattcacataactattgagcctctctatcgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagacgttttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttattcgcaaaagtggtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacctataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagctaaatatatcatgaaacgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatattgtcacaaatacagaagtatgataacttaataacacct
gtagtagattcattgaaatacctcacttcattgaattatgatgtcttggcctattgtatc
attgaagctttagctaatccagaaaaggagagaatgaaacatgatgacacaaccatctca
agctggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgaca
atggaacaactagaggccatgactggtggagagcaactaaaagctgagggtggttatttt
ggccagatcagaaacactaaaaaatcctcccagagattaaaggatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggggtaatctttcag
gaaggtggagagaaacatttgaaacttgtgggaaagctctatgatcagtgtcatgatacc
ctggtacagtttggtgggtttttagcatctaatctaagcacagaagattatataaaacga
gtgccttcaattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccatatttcatcaaagtatgatgaacttaaaaaatca
gaaaagggaagtaaacagcaacataaagttcataagtacattacatcatgtgaaatggtg
atggctcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcaattttacgccacgttctggtcattgacaatgtatgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaagagaaagagcgctgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggaaaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgacataatttacacagttgcaagctgtactgaaaatgaagct
agtcgatatgggagatttctctgctgcatgttggagactgtgaccaggtggcacagtgat
agagccacatatgaaaaagaatgtggaaattatcccggattccttactatattacgggca
actggatttgatggtggaaataaagccgatcaattagactatgaaaattttcgacatgtt
gtacataaatggcattataaactaaccaaggcatcggtacattgccttgaaacaggcgaa
tatactcacatcaggaacatcttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatctgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacagaacgggcctggtggtgggccttcttcgtcggcgctaggaagtgca
tcaaaatcggatgagagcagcactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccgaaagggaattcaagcaatgga
aatagtggctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagaacggccaaataaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaagaccactgtccccaacgtagaatcaaaatcaactcaagaa
aaggagagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgttaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccc
cgatcagatattgcagagcctgaaagggaacaaaaacgccgcaaaattgatactcaccct
tctccatcacattcctccacagtaaaggttacagccatacttcccaaagttcctctgggt
tctgagaactatgccagctcacctgtcatctccattcattttctacaggacagtctcatc
gaactcaaggagtcttcagcaaagctctaccttaatcatactcctctaccactgtccaag
agtaaggagagagaaatggacaagaaagatttggacaagtcgagggaaagatccagagaa
agagagaaaaaagatgaaaaggacaggaaagagcggaaaagggatcactcaaacagtgac
cgtgaagtgccaccggacttaaccaagaggcgaaaagaggaaaatggaacaatgggggtt
tcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaatgagaaagacaaggaa
aaaaataagtcaaaatcttcaggcaaagaaaaaggcggcgattcatttaaatcagaaaag
atggataaaatctcctccggtggcaaaaaggagtccaggcatgataaagaaaagatagaa
aagaaagagaaacgagacagttcaggaggaaaggaagagaagaaacatcataagtcctcg
gacaagcacagataa
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integrated database retrieval system
