Equus asinus (ass): 106830014
Help
Entry
106830014 CDS
T04645
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X2
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
eai
Equus asinus (ass)
Pathway
eai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106830014 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
eai04990
]
106830014 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
eai04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106830014 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106830014
NCBI-ProteinID:
XP_014694883
LinkDB
All DBs
Position
3:173577200..173773484
Genome browser
AA seq
596 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAQG
MTHLEAQNKIKGCTGSLNMTLQRASPTSKPELVPVQKGEPKEVVKPVPITSPAVSKVTST
TNMTYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPPPVAAVTPPPFAASGLH
ANANLSADQRPSALSAGKPAVTVPRQPTVTSVCAETAQELAEGQRRGSQGDSKQQNGPPK
KHIVERNTEFYHIPTHSDASKKRLIQDTEDWHPRTGTTQSRSFRILAQITGTEHLKESET
DNTKKANNTQEPSQQLPVSVASARSMPERPASPASARAGVASLTTAAAFKPLGSSSAVKS
PGWQRPHQAAPSTGRISNSATSSGAGAPASSAGGQPQPGDQDTLVQRAEHIPAGKRTPMC
AHCNQVIRGPYLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRG
CEFPIEAGDMFLEALGSTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtccttggttggcccagctccttggggtttccggctgcaaggt
ggcaaagatttcaacatgcctctgacaatctctagtctaaaggatggcggcaaagcatcc
caggcgaacgtaagaataggcgatgtggttctcagcattgatggaataagtgctcaagga
atgactcatctcgaagcccagaacaagattaagggctgtacaggctctttgaatatgact
ctgcaaagagcatctcctacatccaagcctgagctggttcctgttcaaaagggagaacct
aaagaagtagttaaacctgtgcccattacatctcctgctgtgtccaaagtcacttccacc
accaacatgacctacaataaggcaccccggccctttggctctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtccgccttcaccccagcccatgcgaccacttcatcacat
gcttcccctccacccgtggctgctgtcacacctcccccatttgctgcgtctggactgcat
gctaatgccaatcttagtgctgaccagcgtccatctgcactgagcgctggtaaacctgca
gttactgtcccacggcagcccacagtcaccagcgtgtgtgccgagactgctcaggagcta
gcagagggacagagaagaggatcccagggtgacagtaaacagcaaaatggcccacccaaa
aaacacattgtggagcgcaacacagagttttatcacatacccactcacagtgatgccagc
aagaagaggctgattcaggatactgaggactggcatccaaggaccggaacaacccagtct
cgctctttccgaatcctcgcccagatcactgggaccgagcatctgaaagaatctgaaact
gataatacaaagaaggcaaacaacacccaggagccttctcagcagctgcctgtgtccgtg
gcttcggcacggagcatgcccgagaggccggcgagcccagcctccgccagggcaggggtg
gccagcctcaccaccgctgccgccttcaagcctctgggatccagcagcgctgtcaagtct
ccgggctggcagcggcctcaccaagcagcaccttccactggaagaatctcaaacagtgcg
acttcctcaggagcaggggcaccagccagctcagcaggggggcagccccagccaggcgac
caggatactttagtgcagagagccgagcacattccagctgggaagcggaccccaatgtgc
gcccactgcaaccaggtcatcaggggaccatacctggtggcactggggaaatcttggcac
ccggaagaatttaactgtgcgcactgcaaaaatacgatggcctacattggatttgtggag
gagaagggagccctgtattgtgagctctgctatgagaagttctttgctcctgaatgtggt
cgatgccaaaggaagatccttggagaagtcatcaatgccttgaaacaaacttggcatgtt
tcctgtttcgtgtgtgtggcctgtggaaaacccatccgtaacaatgttttccacttggag
gatggtgaaccctactgtgagactgattactacgccctctttggtaccatatgccgtggg
tgtgagtttcccatagaggctggcgacatgtttctggaagctctgggctctacctggcat
gacacttgcttcgtgtgctcagtatgttgtgaaagtttggaaggtcagacctttttctcc
aagaaggacaagccactttgcaagaaacatgctcattctgtgaatttttga
DBGET
integrated database retrieval system
