Equus asinus (ass): 106830588
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Entry
106830588 CDS
T04645
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X8
KO
K13126
polyadenylate-binding protein
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106830588 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
106830588 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106830588 (PABPC4)
03041 Spliceosome [BR:
eai03041
]
106830588 (PABPC4)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106830588 (PABPC4)
mRNA cycle factors
Stress granule specific factors
106830588 (PABPC4)
Spliceosome [BR:
eai03041
]
Complex C
Other components
Complex C specific factors
106830588 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
106830588
NCBI-ProteinID:
XP_014695696
LinkDB
All DBs
Position
5:complement(31924889..31940688)
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AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcagccagcagctaccccatggcctccctgtacgtgggcgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccggatcatgtggtctcagagggatccctctttgagaaaatctggtgtggggaac
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttctct
gcttttggaaacattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgagaa
gctgagcttggagccaaagccaaggaattcaccaatgtttacataaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctattcagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggatttggctttgtgagttatgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaaacggaaattt
gaacagctgaagcaggagagaattagtcgatatcagggggtaaatctctacattaagaac
ctggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggatctatc
accagtgctaaggtaatgctggaggatgggagaagcaaagggttcggctttgtctgcttc
tcatctccggaagaggcaactaaagcagtcactgaaatgaatggacgcatcgtgggctcc
aagccactgtatgttgccctggcccagaggaaggaagagagaaaggctcacctgaccaac
cagtatatgcagcgagtagctgggatgagagcactccctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctacttcgtgccagcagttccacaggctcagggaagacct
ccatattatacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccaatctgggcctcgtcca
actcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactacc
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
aacttagcacctcgtgctgctgttgctgccgctgcccctcgggctgttgcaccttacaaa
tatgcgtccagtgtccgcagccctcaccctgccatacagcctctgcaggcaccccagccg
gcggtccacgtgcaggggcaggagcccctgaccgcctccatgctggctgcagcacccccc
caggaacagaagcagatgctgggagaacgtttgttcccgctcatacagaccatgcattca
aacctggctggaaagattacagggatgctgctggagatcgacaactccgagctgctgcac
atgctggagtcccctgagtcgctccgctccaaggtggatgaagctgtggcggttctgcag
gctcatcacgccaagaaggaagctgcccagaaggtgggcgctgtcgctgctgctacctcc
tag
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