Equus asinus (ass): 106832330
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Entry
106832330 CDS
T04645
Symbol
HDGFL2
Name
(RefSeq) LOW QUALITY PROTEIN: hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eai03400
]
106832330 (HDGFL2)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106832330 (HDGFL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
106832330
NCBI-ProteinID:
XP_044608365
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All DBs
Position
20:3170868..3191969
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AA seq
705 aa
AA seq
DB search
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADPAGGSEDDEDR
GVMAVTAVTATAASDRMESDSDSDKSSDNSGLKRKAPALKMSVSKRARKASSDLDQGSVS
PSDEENSESSSESEKTSDQDFTPEKKAVVRAPRRGPLAGRKKQKAPSASDSDSKADSDAP
QGEPPAVPASASSSASSSASDSDSDVSVKKPPRGRKPAEKPPLKPRGRKPKPERRPPSSS
SSDSDSDEVDRISEWKRRDEARRRELEARRRRAQEEELRRLREQEQEEKARRRARPERER
GEAPAAGSGGSSGDAPGDEDEPVRKRGRQGRGPQSSSDSEPEAELDREAKKSAKKLQSAE
PVRRASQKEKRGRPDDKPRARPVKVERTRKRSEGFPPDRKVEKKKEPSVEEKLQKLHSEI
KFALKVDNPDVKRCLNALAELGTLQVTSQILQKNTDVVATLKKIRRYKANKEVMEKAAEV
YTRLKSRVLGPKIEAVQKASRPGTEKERAEAEKAEEPLAGEEAPTERAEDEASTDLSAPV
NGEATSQKGDSTEDKEQEEGQNSEGGPGGGSSEDLLHNDNAGGPPAWPRPGRSTRGRART
PSPRTTRTAEPRRCLPPAARRPGSRELLGKRRAVVCICPPGFFSA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgccttcaaacccggggacttggtgttcgccaagatgaagggctacccgcac
tggccggcccggatcgatgacatcgccgacggagccgtgaagcccccgcccaacaagtac
cccatcttcttcttcggtacacacgaaacagccttcctgggccccaaggacctgtttccc
tacgacaaatgtaaagacaaatacggcaagcccaacaagaggaaaggcttcaatgaagga
ctgtgggagatccagaacaatccccacgccagctacagcgctcctctgccggtgagttcc
tccgacagtgaggcccccgaagctgacccagccggtgggagcgaggacgacgaggaccgg
ggggtcatggccgttacagccgtgaccgccacagccgccagcgacaggatggagagcgac
tcggactcagacaagagcagtgacaacagcggcctcaagcggaaggcgccggccttgaag
atgtccgtctcaaaacgagctcgaaaggcctccagcgacctggaccaaggcagcgtgtcc
ccgtccgacgaggagaactcggaaagctcgtctgagtcagagaagaccagcgaccaggac
ttcaccccagagaagaaagccgtggtccgggcgccacggcggggccccctcgcaggacgg
aagaaacagaaggcgccgtcggcctcggattcggactccaaagccgactcggacgcgccg
cagggggagccgccggccgtgcccgcgtctgcgtcgtcctccgcgtcgtcctccgcctcc
gactcggactcggacgtgtcggtgaagaagccgccgcggggccgcaagccagccgagaag
ccgcccctgaagccgcgcgggcgcaagccgaagccggagcggcggccgccgagcagctcg
agcagcgacagcgacagcgacgaggtggaccgcatcagcgagtggaagcggcgggacgag
gcgcggcggcgcgagctggaggcgcggcggcggcgcgcgcaggaggaggagctgcggcgg
ctgcgcgagcaggagcaggaggagaaggcgcggcggcgcgcgcggcccgagcgcgagcgc
ggggaggccccggccgcgggcagcggcggcagcagcggtgacgcgcccggcgacgaggac
gagcccgtgcggaagcgcggccgccagggccgggggcctcagtcctcctccgactcggag
cccgaggccgagctggacagagaggcgaagaagtcggctaagaagttgcagagcgcggag
cccgtgaggagagccagccagaaggagaagcgagggcggcccgacgacaagccccgggcc
aggcctgtgaaggtagagcgaactcggaagcggtcggaagggttcccgccggaccggaag
gtcgagaagaagaaagaaccttctgtggaggagaagcttcagaagctgcacagtgagatc
aagttcgccctgaaggtcgacaatccggacgtgaagaggtgtctgaacgccctcgccgag
ctggggaccctgcaggtgacctcgcagatccttcagaagaacacagatgtggtggccaca
ttgaagaagattcgccgttacaaggccaacaaggaggtgatggagaaggccgcggaggtc
tacacccggctcaagtcgcgggtcctgggaccaaaaatcgaggccgtccagaaggcgagc
agacctgggacagagaaggagagagccgaggcggagaaggccgaggagccgctggctgga
gaggaggcccccacggagcgagcggaggatgaggcgagcactgacctctcggccccggtg
aacggtgaggccacgtcccagaagggggacagcaccgaggacaaggagcaggaggaagga
cagaactcagagggggggccggggggcggctcctccgaagacctgctgcacaatgacaac
gcgggagggcccccggcctggccgcgcccgggaaggagcacgagagggcgcgcgcggact
ccgagtccgcggacgacgaggacagctgagccccggcgctgcctgccacccgccgcccgc
cgcccagggagcagagaactgttggggaaacgccgtgctgttgtttgtatttgtccccct
gggtttttttctgcctaa
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