Equus asinus (ass): 106834504
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Entry
106834504 CDS
T04645
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
eai
Equus asinus (ass)
Pathway
eai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106834504 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eai04131
]
106834504 (VPS8)
Membrane trafficking [BR:
eai04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106834504 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-RING_5
zf-C3H2C3
zf-RING_UBOX
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
106834504
NCBI-ProteinID:
XP_014701630
LinkDB
All DBs
Position
5:75265546..75499494
Genome browser
AA seq
1455 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNIEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDTFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNCVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSSEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLKPCKAAELVATHFSEQIEAVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQISPCITEQFIELLCQFNPDQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQEENTKEDSSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSAAPHLHAEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIEIEGQTRWTCYKCRSSNKVGKLSE
NSSEIKKGRITPSQVKMSPSCHPSKSDPAVKKTGKAGKTEAIMVAAQNRHTVTGGAGKGA
TSEPVLDPQQIQAFDQLCHLYRASSRLALLTELSQNRSSESYRPFSSSQSGPAFNSIFQN
ENFQLQLIPPPVTED
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgctaagactactgaa
gaagagctgaataagtctttcaatatagaagcttcactttcaaagttctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgaaactgatgatgaagatgaa
tcttttgttctcgaggatcctacattgttaaacattgatactatcgattctcactcctat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacctaaaaaggaagaag
aaattacctgatactttttcactccatggctcagttatgcgacattcgcttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatgga
gccatctctgcactcagtatcaacaatgactgctcaaggcttctctgtggctttgctaaa
ggacagattactatgtgggatttggccagtggaaaacttctcagatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaacgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagg
acttgtgaatctagatgtctgttcagtggctccaagggtgaagtttgctgcattgaacct
ctccattccaagccagagttgaaagatcatcccatcacacagttttccctactggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggacccttctagtgttccattgctggcctggcactttgtggca
gtgcataattgtgtgaatcccatgcttgccttctgcagaggagatgtcgttcattttctg
ttggttaagagagatgaatctggagcaatacatgttactaagcaaaagcatcttcaccta
tactatgacctcatcaactttacttggataaactcacgcacggttgtgctcttggacagt
gtggagaagttgcatgtgattgatcggcaaactcaagaggaactggaaacagtggagatc
tcagaagtccaactggtctataatagcagccatttcaaatcactggccaccggaggaaat
gtcagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttacgtgatgatgctgaggagctgg
agagagagagtggatcatctgctgaaacaagattgtcttacggaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgccagtaag
cgaaaggctgttgtggcagatcggatggtggaaatcctgttccattatgcagatcgagct
ctgaaaaagtgcccagatcagggaaaaatccaggtgatggagcagcattttcaggatatg
gtgcctgtcatagttgattactgccttctgctgcagcgaaaagatcttttatttagccag
atgtatgacaaattaagtgagaattcagtggccaaaggagtgtttttggagtgccttgag
ccatatattttaagtgataaattggtggggatcacaccccaggtaatgaaagacttgatc
gttcatttccaagataaaaagttaatggagaatgtggaagccctcattgtacatatggat
atcacgagcctagatattcaacaggtagttctcatgtgttgggaaaatcggctatatgat
gctatgatctacgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaagacgctaacagatgaacaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtctagcaggccgtgcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctaatt
cgcctgcactcatcagaagcatcccctgaggaagaaatctatccctatgttcggactttg
ctacattttgatacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagccgtagaatatcaacaacgtattgtggatattttgttgaaagttatg
gtggagaattctgattttactccctcacaagtggggtgtctctttacgttcctcgcccgg
cagctcgcaaagcctgacaatactttgtttgttaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgacgatgactcacgacactctgaaagacagcaggtcctttta
gaattgctgcaagctggaggcatagtccaatttgaagagagtcggctcatccgtatggca
gaaaaagcagagttctatcaaatttgtgagtttatgtatgaacgagaacaccaatatgac
aaaattattgattgctacttacgtgacccactaagagaggaagaagtcttcaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatattgaggaactggtgtccctaaagccctgtaaagctgcagagctggtt
gctactcacttttctgaacagattgaagcagtcattaaaaaacttcagaaccaagttttg
cttttcaaatttttgaggagtcttctagacccaagggaaggtattcatgtaaatcaagaa
ttgcttcaaatatctccctgtattacagagcagttcattgagctgctctgtcagttcaac
ccggaccaagttatagagacgctgcaagtccttgagtgctaccgcctagaggaaactatt
cagattacccagaagtatcaacttcatgaagtcactgcttatctattagaaaagaaagga
gatattcatggtgccttcttaataatgctaaagagactacagagcaaacttcaagagata
acacatcaagaagaaaatactaaagaggattcctcgttgaaggatgttgaagataccatg
gtagagacaattgccctttgccagagaaattcacataatttgaaccagcagcagcgagag
gcactctggtttccattattagaggcaatgatggcccctcagaagttgtctagttcagca
gctcctcatctacatgctgaagctctgaaatctttgaccatgcaagtcctaaacagcatg
gcagcatttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gaacaaaccctgctggaaacaactactagccttctaaaccaagatctccattggtcgttg
tgtaacctgagagcttcggtcaccagaggactgaaccccaagcaggattactgctccata
tgtttgcagcagtacaagagacgccaagagatggctgatgaaattattgtctttagctgt
ggccatctgtatcactcattctgtctgcaaaacaaagagtgcaccatcgaaattgagggg
cagacaagatggacatgctacaaatgccgctcaagtaacaaagtaggaaaattaagcgaa
aattcatctgaaattaaaaagggaaggataaccccatcacaggtaaaaatgtctccatcc
tgtcatccatccaaaagtgatcctgctgttaagaagacgggaaaagcaggcaagactgag
gcaataatggttgctgctcagaaccgtcacaccgtaacaggaggagctggaaagggcgca
acctcagagcctgttctggatccacagcaaatacaagcatttgatcagctttgccatctc
taccgagcaagttccaggctggctctccttacagaactctcccagaatcgcagcagcgag
agctacaggccgttcagtagctcccagagtggcccggctttcaacagcatcttccagaat
gagaacttccagctgcagctcattcccccgcctgtgacggaggactga
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