Equus asinus (ass): 106835596
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Entry
106835596 CDS
T04645
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106835596 (DDX1)
03016 Transfer RNA biogenesis [BR:
eai03016
]
106835596 (DDX1)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106835596 (DDX1)
Spliceosome [BR:
eai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106835596 (DDX1)
Transfer RNA biogenesis [BR:
eai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106835596 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
106835596
NCBI-ProteinID:
XP_014703563
UniProt:
A0A9L0KJ99
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All DBs
Position
6:12792162..12834253
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGRHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPQHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKALDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKDDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAIGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgaaatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgagtctatcccactgatcctgggaggaggt
gatgtacttatggctgcagaaacaggaagcggaaaaactggtgctttcagtattccagtt
attcagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaagtggcaaatgaatccatatgatagaggatct
gcttttgcaattgggtcagacggtctttgttgccaaagcagagaagtaaaggaatggcat
ggatgtagagctactaaaggattaacgaaagggagacactactatgaagtatcctgtcat
gaccaagggttatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccataataaacaatttgat
aattatggcgaggaattcactatgcatgataccattggatgctatctagatatagataaa
ggacatatcaaattctccaaaaatgggaaagaccttggtctggcatttgaaataccacaa
catatgaagaaccaagctctctttcctgcctgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagagtttaagtttccaccaaaagatggttttgttgctctttccaag
gcattggacagttacgttgtcaaatcgcagcacacaggtaatgcacaggtggcacaaaca
aagtttctccccaacgctccaaaagctctcattgttgaaccctcccgagagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaactaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccgggaagactagatgatttggtgtcaactggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcagggttat
tccgatttcattaataggattcacaatcagattcctcagatcacctctgatggaaagaga
cttcaggtgattgtttgctctgctactttacattcttttgatgtaaagaaactgtctgag
aagataatgcattttcccacgtgggttgatttaaaaggagaagattctgttccagatact
gtacaccatgttgttgtcccagtgaatcctaaaactgacagactctgggaaaggcttgga
aaaaaccacattagaactgatgaagtacatgcgaaagataacacaagacctggtgctaac
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttttgtagaaccaaaattgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtttgtcttcatggtgacaggaaacctcatgagaggaagcaaaacttggaaagg
tttaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttacgttataaatgtcaccttgccggatgaaaagcaaaactacgta
catcgaattggcagagtgggaagagctgaaaggatgggtctggctatttccctggtggca
acagaaaaagagaaggtttggtaccatgtgtgtagcagccgtggaaaagggtgttataac
acgagactcaaggatgatggcggctgcaccatatggtacaatgagatgcagttgctgtct
gagatagaagaacacctgaactgtaccatttctcaggtcgagccagatataaaggtaccc
gtggatgaatttgatgggaaagttacctatggtcaaaaaagggccattggaggtggaaac
tataaaggccatgtggatattttggcacctacagttcaagagttggctgcccttgaaaag
gaggcacagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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