Equus asinus (ass): 106836431
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Entry
106836431 CDS
T04645
Symbol
DHX8
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
eai
Equus asinus (ass)
Pathway
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106836431 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106836431 (DHX8)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106836431 (DHX8)
Spliceosome [BR:
eai03041
]
Complex C
Other components
Step II factors
106836431 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106836431
NCBI-ProteinID:
XP_014704792
LinkDB
All DBs
Position
13:44860548..44890301
Genome browser
AA seq
1226 aa
AA seq
DB search
MAVAVAVAGAVNGTDLGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPIVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAAQEKQRDVEHRDKTKKKKRSRSR
ERDRDRDRDRDRERDRDRDRDRDHKRRHRSRSRSHSRTRERNKGKSRYRSRSRSQSPPKD
RKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL
VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL
VGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKE
EFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQ
AAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPND
IPEWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGK
TTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSP
ETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLI
VTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPG
DILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRK
VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRT
GPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETL
ITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSV
QNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR
AQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVY
IHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKK
QQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggccgtggccggagccgtgaacgggacggatctgggccccgcggaa
gaactcgccaaactcgagtacttgtctttagtgtcgaaggtttgcaccgagctggacaat
cacttggggatcaacgacaaggatctggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacggattct
cttattagtaacttgctgcgtctcatacaaaccatgcgacctccagcgaagccttctact
agcaaagatccaattgttaaacccaaaactgaaaaagaaaagctgaaggaactcttccca
gtgctttgccaaccagacaacccttccgttcggaccatgctggacgaggatgatgtgaaa
gtcgctgtggatgtcctgaaggaactggaggccttaatgcccagcgcggcagcccaggag
aagcaaagagacgttgagcaccgggacaagacaaagaaaaagaagcggagccggagccga
gagcgggaccgcgaccgagatcgagatcgagacagagagcgagaccgagaccgagaccgc
gatagggaccacaagcggagacaccggtcccgctctcggtcacattccaggacccgggag
aggaataaagggaagtctagatatcggtccaggagcagaagtcagagtccccccaaagac
cggaaggaccgagacaagtatggggagaggaatctggacagatggcgggataagcatgtg
gaccgccctcccccggaagagcctgccatcggggacatttacaatggcaaagttaccagc
atcatgcagtttggatgctttgtgcagctggagggactaaggaagcggtgggaaggcctg
gtgcacatctctgagctccggcgggaaggccgtgtggccaatgtggctgatgtggtgagc
aaaggccagagggtcaaggtcaaagtgctgtccttcactgggaccaagaccagcctgagc
atgaaggatgtagatcaagagactggagaagatctaaacccaaatcggcgacgaaatctt
gtcggggagaccaatgaggagacgtcaatgaggaatccggacagacccactcacctctcc
ctcgtcagcgcccctgaagtagaggatgactcgctggagcgcaagcgcctcacccgcatc
tctgacccagagaagtgggagatcaaacagatgatcgctgccaatgtcctttccaaagag
gagtttccagactttgacgaggagactggcattctccctaaggtggatgatgaagaagat
gaggaccttgagatcgaactggttgaagaagagcctccattcctgagaggacacaccaag
caaagcatggacatgagccctattaagatcgttaagaaccctgatggctccctctcccaa
gcagcgatgatgcagagcgctttggccaaagaaaggcgggaactcaagcaggcccagcgg
gaagccgagatggattctattcccatgggactcaacaaacactgggttgatcctctgcct
gatgcggaaggcaggcagattgctgccaacatgaggggtattgggatgatgcccaatgac
attcccgagtggaagaaacatgcatttgggggcaataaagcttcttatggaaaaaagaca
cagatgtcaatcattgagcagagagagagcctgcccatctacaaactgaaggagcagctg
gtccaggctgtccatgacaatcaaatcctgattgttatcggagagacaggatctgggaag
acaacgcagatcactcagtacctggcggaggcaggctacacttccaggggcaagatcgga
tgtacccagccgagaagagtggcagccatgtcagtggccaagagagtgtcagaggaattt
ggttgttgcttaggccaggaggtgggctacaccattcgatttgaggactgcaccagcccg
gaaacagtcatcaagtacatgacagatgggatgttgctccgagagtgcctgattgaccct
gatctcactcagtacgcgatcatcatgttggatgaggcgcatgagagaacaattcacact
gacgtgctctttgggttgttgaaaaagaccgttcagaaacggcaggacatgaagctgatt
gtcacctcagccaccttggatgcagtgaagttttctcagtacttctacgaggctcccatc
ttcaccatcccaggtcgaacatatccggtggaaatcttgtacacaaaggagcctgagaca
gactatctggacgccagcttgatcacggtcatgcagatccatttaacagaaccgccaggt
gatatcctggtcttcctgactgggcaggaagagatcgatactgcttgtgagatcttgtat
gaaagaatgaaatccctgggacctgatgttcctgagctgattatcctcccagtgtactct
gctcttcccagtgagatgcagacccgaatctttgacccagccccacctggcagcagaaag
gtcgtgattgccaccaacattgctgagacatcgctgactattgacggcatttactatgtg
gtggaccctggattcgtgaagcagaaagtgtataattccaagacagggattgaccagctt
gtggtgacccctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaaca
ggcccggggaagtgttaccggctgtacacagaacgtgcctaccgagatgaaatgctgacc
accaatgtgccggaaatccagagaaccaacttagccagcactgtgctctcgctcaaggcc
atgggcatcaatgacctgctgtcctttgacttcatggatgccccaccaatggaaaccttg
atcacagccatggagcagctgtacacgctaggggccctggacgacgagggcctgcttact
cgcctgggccgcaggatggcagaattccccctggagccaatgctgtgcaagatgctgatc
atgtctgtgcatctgggctgcagtgaggaaatgctgaccatcgtgtccatgctgtctgtg
cagaatgtcttctacaggcccaaggataaacaagcccttgcagatcagaagaaggccaaa
ttccaccagaccgaaggggaccacctcaccctgctggccgtgtacaattcctggaagaac
aacaagttctccaacccatggtgctatgagaactttatccaggctcgttccctgcgccgg
gcccaggacattcgcaagcagatgttaggcataatggacagacacaagctggatgtggtc
tcctgtgggaagtccacagtccgagtgcagaaggccatctgcagtggattcttccgaaat
gctgccaagaaagacccgcaggagggttaccggacactgatagaccagcaggtggtctac
atccatccttccagcgcgctcttcaacaggcagccggaatgggtggtgtaccacgagctg
gtgctgaccacgaaggagtacatgcgcgaggtcaccaccatcgacccccgctggctcgtg
gagtttgctcccgcctttttcaaggtctccgacccgaccaagctaagcaagcagaaaaag
cagcagcgccttgaacccttgtacaaccgttatgaggagcccaacgcctggagaatatcc
cgggccttccggcggcgctga
DBGET
integrated database retrieval system
