Equus asinus (ass): 106836949
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Entry
106836949 CDS
T04645
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16
KO
K16494
protocadherin beta
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eai04515
]
106836949
Cell adhesion molecules [BR:
eai04515
]
Cadherins
Protocadherins
106836949
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
106836949
NCBI-ProteinID:
XP_014705702
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Position
12:18491670..18496402
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AA seq
796 aa
AA seq
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MEIGWTCNRRQRQVLVFFVLLSMSRARAELGPYSVVEETERGSFVANLGKDLGLGLTEMS
TRGARIISQGNKEHLQLKVQTGDLLINEKLDREELCGPTEPCVLHFQVLMEKPLEIFQAE
LRVKDINDHSPMFTEREMILKVPENSPLGIAFPLSNALDLDVGSNNVENYKISPNSHFQV
LTRNRSDGRKYPELVLDKELDREEEPEILLTLTAMDGGSPPRYGTAQVRIEVVDSNDNAP
EFGQPFYRVHIPENSPVGSLVVTVSASDLDSGVYGKISYTLFQPSEDISKTLEVNSVTGE
IRLRKQVDFETVQSYEVDIKATDGGGLSGKCTLLLQVVDMNDNPPEVTISALTSPIPENT
PEVVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTEGALDRESRAEYNIT
ITVTDMGSPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRENNNPALHIGSVSATDRDA
GANAQLTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFGVGATDRGSPA
LSSQARVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWPHNGEVRTARLLSERDAPKHRLLVQVRDNGEPPRSASVTLHV
LLVDGFSQPYLPPLPEAAPEQARADPLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRA
ASLGGCSVPEGPFPGHLVDVSGSGTLSQSYQYEVCLRGGSGTSEFKFLKPILPNLSSQSR
GREVEENPSFRNSFGI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggacctgcaatcggagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtctagggcgcgcgccgagttggggccctattcagtagtggaagaaacggag
agaggctcctttgtggcaaatctaggaaaagacctggggttggggttgacagagatgtcc
actcggggggcccggatcatttcccagggaaacaaagagcatttgcagctcaaggtacag
actggggatttgctcataaatgagaaactagatcgagaggagctatgtggtcccactgag
ccttgcgtactacatttccaagtgttaatggaaaaacccttagagatatttcaggctgaa
ctgagggtgaaagacataaatgaccattctcccatgttcactgagagagaaatgattcta
aaagtaccggaaaacagtcctctaggaattgcattccctctgagtaatgctctggacttg
gacgtaggaagcaacaatgttgagaactataaaatcagccccaactcccatttccaagtc
ctaacccgcaatcgcagtgacggcagaaaataccctgaactggtgttggacaaagaactg
gatcgggaggaggagcctgaaatcttattaaccctgacagcgatggatggcggctctccg
cctcgatatgggaccgcccaggtgcgcattgaagtggtggacagcaatgataatgcccca
gagtttgggcagcccttctacagggtgcatattcctgagaacagccctgtaggctccctg
gttgtcaccgtctctgccagcgatttagacagtggagtctatggaaaaatatcatacaca
ctctttcagccttcagaagatattagcaaaactttggaggtaaattctgtgacaggagaa
attcgactgagaaaacaagtagattttgaaacagttcagtcttatgaagtggatatcaag
gccactgatgggggaggtctttcgggaaaatgcactcttctcctgcaggtggtggacatg
aatgataatcccccagaagtgaccatatccgcactcaccagccccatcccagagaacacg
cctgaggttgtagttgccgttttcagtgtttcagatcctgactccggggacaacgggaag
actatttcctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaatttc
tacaccctggtaacagaaggagcgcttgacagagaaagcagagccgagtacaacatcacc
atcacggtcaccgacatgggatccccaaggctgaaaacccagcacaacataaccgtcctg
gtctccgacgttaacgacaacgccccggccttcacccaaacctcctacaccctctgggtc
cgcgagaacaacaaccccgccctgcacatcggcagcgtcagcgccacggacagagacgca
ggcgccaacgcccagctcacctactcgctgctgccgccccaagacccgcacctgcccctg
gcctccctcgtgtccatcaacgccgacaacggccacctgttcgccctcaggtccctggac
tacgaggccctgcaggccttcgagttcggcgtgggcgccacggaccgcggctcgccggcg
ctgagcagccaggcgcgggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccccgggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtggccgcac
aacggcgaggtgcgcacggccaggctgctgagcgagcgcgacgcgcccaagcacaggctg
ctggtgcaggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcccagccctacctgccgccgctgcccgaggcggcgcccgag
caggcgcgggccgacccgctcaccgtctacctggtcgtcgcgctggcgtcggtgtcgtcg
ctcttcctcctgtcggtgctgctgttcgtcgcggtgcggctgtgcaggaggagcagggcc
gcgtcgctgggtggctgctcggtgcccgagggcccctttccgggccacctggtggacgtg
agtggcagcgggaccctgtcccagagctaccagtacgaggtgtgtctgaggggaggctcg
ggtaccagcgagttcaagttcctcaagccgattctccccaatctctcatcccagagcaga
gggagggaagtggaagaaaatccctcgtttaggaatagctttgggatttaa
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