Equus asinus (ass): 106836967
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Entry
106836967 CDS
T04645
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
eai
Equus asinus (ass)
Pathway
eai03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106836967 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eai01009
]
106836967 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eai04515
]
106836967 (PCDH1)
Protein phosphatases and associated proteins [BR:
eai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106836967 (PCDH1)
Cell adhesion molecules [BR:
eai04515
]
Cadherins
Protocadherins
106836967 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
106836967
NCBI-ProteinID:
XP_014705741
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All DBs
Position
12:complement(19107050..19133008)
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AA seq
1252 aa
AA seq
DB search
MGRRCSRPVPAPYQLLQLEQTLLLHPAKALLILELARMGPLRPSPGPRGQRLLLSPFLLA
LLLLLAPSPGHATRVVYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGSPYLRVDGKT
GDIFTTETSIDREGLRECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNT
PNFASPVITLPIPENTNIGSLFSIPVASDRDAGPNGVATYELQAGPEAQELFGLQVAEDQ
EGKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSY
EAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPV
DREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANIS
EDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLD
YEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVV
AEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAA
DRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENA
RVQLTVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINV
LDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLF
QIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETL
LGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSG
YQAGKKETKDLYAPKPSSKASKGNKGKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDA
PGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVG
TGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEE
SETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECS
EFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPV
RLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcgctgctctagacctgttccagccccttaccagctcctccagctggagcag
acactgctgctacacccagctaaagcccttctgattctggagcttgccaggatggggccc
ctgaggcccagcccaggccccagggggcaacggttgctgctgtccccctttctgctggca
ctgctgctcctgctggctccatcaccaggccatgccactcgggtggtgtacaaggtgccg
gaggaacagccgcccaacaccctcattgggagcctcgcagccgactacggttttccagat
gtgggccacctgtacaaactagaggtaggctctccatacttgcgggtagatggcaagaca
ggcgacatcttcaccaccgagacctctatagaccgtgaggggctccgtgagtgccagaac
cagctccctggtgagccctgcatcctggagtttgaggtgtctatcacggacctcgtgcag
aatggcagtccccggctgctagagggccagatagaggtacaggacatcaacgacaacaca
cccaacttcgcctcgccagtcatcacgctgcccatccctgagaacaccaacattggctca
ctcttctccatccctgtggcttcggaccgtgatgctggccccaatggtgtggcgacctat
gagctgcaggccgggcctgaggcccaggaactatttgggctgcaggtggcagaggaccag
gaggggaagcagccgcagctcatcgtgatgggcaacctggaccgggagcgctgggactcc
tatgacctcactatcaaggtgcaggatggtggcagccccccacgcgccagcagtgccctg
ctgcgagtcactgtgctcgacaccaatgacaacgcccccaagttcgagcggccctcctat
gaggccgagctgtctgagaacagccccataggccactcggtcatccaggtgaaggccaat
gactcggaccaaggtgccaatgcagagattgactacacattccaccaggcacctgaagtt
gtgaggcgtcttctgcgactggacaggaacactgggcttatcactgtgcagggccccgtg
gaccgtgaagacctaagtaccctgcgcttctcagtgcttgccaaggaccgaggcaccaac
cccaagagtgcccgtgcccaggtggtggtgactgtgaaggacatgaatgacaacgccccc
accattgagatcaggggcatcgggttggtgacccatcaagacgggatggctaacatctca
gaggatgtagcagaggagacagctgtggccctggtgcaggtatctgaccgagatgaggga
gagaatgcagctgtcacctgtgtagttgctggtgatgtgcccttccagctacgccaggcc
agtgagacaggaagcgacagcaagaagaagtacttccttcagaccaccaccccacttgac
tacgagaaggtcaaagactacaccattgagattgtggctgtggactccggcaacccccca
ctctctagcaccaactccctcaaggtacaggtggtagatgttaatgacaatgcacccgtc
ttcacccagagcatcactgaggtcgccttcccagaaaacaataagccaggtgaagtggtc
gctgaggtcactgcgagtgatgccgactcaggctccaatgctgagctggtttactctctg
gagcctgagccagctgccaagggcctcttcaccatctcacctgagacaggagagatccgg
gtgaagacatcccttgatcgggaacagcgggacagctatgagttgaaggtggtggcagcc
gaccggggcagccccagcctccagggcacagccactgtcctcgtcaatgtgctggactgc
aatgacaatgaccccaaatttatgctgagtggctacaacttctcagtgatggagaacatg
ccagcgctgagtcctgtgggcatggtaacagtcattgatggggacaagggggagaatgcc
cgggtgcagctcacggtggagcaggacaacggtgactttgttatccagaatggcacgggc
accatcctctctagcctgagctttgaccgggagcagcagagcacttataccttccagctg
aaggcagtggatggtggcgtcccacctcgctcagcttacgttggtgtcaccatcaatgtg
ctggatgagaatgacaatgcacctttcatcactgccccttccaacacttcccaccgtctg
ctaaccccccagacacgtcttggtgaaacagtcagccaagtgacagctgaggacattgac
tctggtgtcaatgccgaactgacctacagcatcgctggtggcaacccttatggactcttc
cagattgggtcacattcaggtgccatcaccctggagaaggagattgagcgtcgccaccat
gggctgcaccgcctagtggtgaaggtcagtgaccgtggcaagcccccacgctatggcaca
gccttggtgcacctttatgtcaacgagaccctggccaaccgcacactgctggagaccctg
ctgggccacagcctggacacaccactggacatcgacattgctggggatccagaatacgag
cgttccaagcagcgtggcaatatcctctttggtgtggtggctggtgttgtggccgtggcc
ttgctcattgccctggcagtgctcgtgcgctactgccggcagcgggaggccaagagtggc
taccaggctgggaagaaggaaaccaaggacctgtatgcccccaagcccagcagcaaagcc
tccaagggaaacaaaggcaagggcaagaagagcaagtctccaaagcctgtgaagcccgtg
gaggatgaggatgaggccgggctgcagaagtccctcaagttcaacctgatgagcgatgcc
cctggggacagcccccgcatccatctgcccctcaactacccaccaggcagccctgacctg
ggccgtcactaccgctctaactccccactgccttccatccagctgcagccccagtcaccc
tcggcctccaagaagcaccaggtggtgcaggacctgccgcctgcaaacacattcgtgggc
actggggacaccacgtccacgggctctgagcagtactccgactacagctaccgcaccaac
ccccccaaataccccagcaagcagttacctcaccgccgcgtcaccttctccgccaccagc
caggcccaggagctgcaggacccgtcccagcacagttactacgacagtggtctggaggag
tctgagacgccatccagcaagtcatcctcggggccccgactcgggcccctggctctgcct
gaggatcactatgagcgcaccacccccgacggcagcatcggagagatggagcaccctgaa
aacgacctgcgccctttgcctgatgtcgccatgacgggcacatgtacccgggagtgcagc
gagtttggccactctgacacgtgctggatgcctggccagtcgtctcccagccgccggacc
aagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgaggagggcaggag
cctgcgggcgccggcagccccagccccccggaagaccggaacaccaaaacggcccccgtg
cgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgcaaggactcg
gccaccttggaggaaatccccctgacccagacctcggacttcccacccgcagccacaccg
gcatctgcccagacggccaagcgcgagatctacctgtga
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