Equus asinus (ass): 106837501
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Entry
106837501 CDS
T04645
Symbol
CAPRIN1
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-1
KO
K18743
caprin-1
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106837501 (CAPRIN1)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
106837501 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
106837501
NCBI-ProteinID:
XP_044606539
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All DBs
Position
17:26424389..26458914
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AA seq
705 aa
AA seq
DB search
MPSATSHGGSGSRSSGPPPAAGSGGEAGAGAAAPAAQHPASGTGAVQTEAMKQILGVIDK
KLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDI
QKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDEEVRTDLKQGLNGVPILSEEEL
SLLDEFYKLADPVRDMSLRLNEQYEHASIHLWDLLEGKEKSVCGTTYKALREIVERVFQS
NYFDSTHNHQNGLCEEEEATSAPAAEDQGAEAEPEPAEEYTEQSEVESTEYVNRQFMAEA
QFSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMA
QMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPAQNMDMPQLVCPPVHAESRLAQPNQVP
VQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPTDQMQATISLNTDQTTASSSL
PAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQAS
YNQSFSSPPHQVEQTELPQEQLQTVVGTYHASQDQPHQVTGNHQQPPQQNTGFPRSSQPY
YNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPRDYSG
YQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacggcgggagcggcagcaggtcgtccgggccgccccccgcg
gcgggctccggcggcgaggcgggggccggggccgcggcgccggccgcccagcaccccgcg
agcggcacgggcgccgtgcagacggaggccatgaagcagatcctcggcgtgatcgacaag
aagctccggaacctggagaagaagaagggcaagctcgatgattaccaagagcgaatgaac
aaaggagaaaggcttaatcaggatcagctggatgctgtgtctaagtaccaggaagtcaca
aataacttggagtttgcgaaagaattgcagaggagtttcatggcgttgagtcaggatatt
cagaaaacaataaagaagacggcacgtcgggagcagcttatgagagaagaagctgaacag
aaacgtttaaaaactgtacttgagctgcagtatgttttggacaaattgggagatgaagaa
gtgcgaactgacctgaaacaaggtttgaatggagtgccaatactctctgaagaagagttg
tcgctgttggatgagttctacaaattagcagaccctgtacgggacatgagcttgaggttg
aatgagcagtatgagcatgcctccattcacctgtgggacttgctggaagggaaggaaaaa
tctgtctgtggaacaacctataaagctctgagggaaattgttgagcgtgttttccagtcc
aactactttgacagcacccacaaccaccagaatgggctctgtgaggaggaagaggcgacc
tcagctccagcagctgaagaccagggagctgaagctgaacctgagccagcagaagaatac
actgaacaaagtgaagttgaatcaacagagtatgtaaatagacagtttatggcagaagcg
cagttcagtggtgagaaggagcaggtggatgagtggacagtcgagacggtcgaggtggta
aattcactccagcagcaacctcaggctgcatctccttcagtaccggagccccactctttg
actccagtggctcaggcagatccccttgtgagaagacagcgagtacaggaccttatggcg
caaatgcaggggccctataatttcatacaggattcaatgctggattttgaaaatcagaca
cttgatcctgccattgtatctgcacagcctatgaatccagcacagaatatggacatgccc
cagctggtttgccctccagttcatgctgaatctagacttgctcaacctaatcaagttcct
gtacaaccagaagctacacaggttcctttggtttcatccacaagtgaggggtatacagca
tctcagcccttgtaccagccttctcatgctacagagcaacgaccgcaaaaggaaccgact
gaccagatgcaggcaacaatctctttaaatacagaccagactacagcatcatcatccctt
cctgctgcttctcagcctcaggtgttccaggctgggacaagcaaacctttacacagcagt
gggatcaatgtaaatgcagcgccattccagtccatgcaaacggtgttcaacatgaatgcc
ccggttcctcctgttaatgaaccagaaactttaaaacagcaaaatcagtaccaggccagc
tataaccagagcttttccagtccgcctcaccaagtagagcagacagagcttccgcaagag
cagcttcagacggtggttggtacttaccatgcttcccaagaccagccccatcaagtgacc
ggtaaccaccagcagcctccccagcagaacactgggtttccacgtagcagtcagccctat
tacaacagtcgtggtgtgtctcgtggaggctcccgtggtgctagaggcttgatgaatgga
tacaggggccctgccaatggattcagaggaggatatgatggttaccgcccttcattctct
aacactccaaacagcggttacacacagtctcagttcagtgctccccgggactactctggc
tatcagcgggatggatatcagcagaatttcaagcgaggctctgggcagagtggaccccgg
ggagccccacgaggtcgtggagggcccccaagacccaacagagggatgccgcaaatgaac
actcagcaagtgaattaa
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