Equus asinus (ass): 106837508
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Entry
106837508 CDS
T04645
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106837508 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106837508 (CSTF3)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106837508 (CSTF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
106837508
NCBI-ProteinID:
XP_014706559
UniProt:
A0A8C4MY51
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Position
17:26102562..26169915
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AA seq
717 aa
AA seq
DB search
MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttacgaacgccttgttgctcag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaaccaagggtaaactgccaagttacaaagaa
aaaatggctcaagcgtatgactttgcactggataaaattggaatggaaattatgtcttat
cagatttgggtggattacatcaatttcctaaaaggcgtggaagctgttggatcttacgca
gaaaatcagagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtattaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattacatgaatgctaggcgtgtagct
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccctcggtgcctcctcag
aatactcctcaagaagctcagcaggtagatatgtggaagaaatacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagacccttataacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtgctgggccatcaccctgatatttggtatgaagccgcccagtat
cttgagcagtcaagtaagctgctcgcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatacgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataacagacttctggcaattgaggatattgaccccaccttggtgtatatccaa
tatatgaaatttgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagatgccagaacccgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaagaaatat
ggagacattccagaatatgtcctggcctatattgactatctttctcacctcaatgaggac
aacaatacccgagttttgtttgaacgagtgttaacgtctggaagccttcctcctgagaag
tctggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatctagcaagt
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtagacagatacaagttcatggacttgtatccttgctctgccagtgaa
ctaaaagcacttggttataaggatgtctcccgtgctaagctggcggctatcattccagac
ccagttgtagctccttccatagtgcctgttctgaaggacgaagtggacagaaaaccagag
taccctaagccggacactcagcagatgattccatttcagccacgacatttagcaccgccg
ggcctgcaccccgttccggggggagtgttccccgtgccgcctgcggccgtcgtgctaatg
aagctcctcccgcctcctatctgcttccagggtccttttgtacaagtggatgaattgatg
gaaattttccgacgatgcaagataccaaataccgtggaggaggctgtgaggatcatcacc
ggcggagcccccgagctggctgtcgagggcaacggccctgtggaaagcaacgcagtcctc
accaaggctgtcaaaaggcccaacgaggactcagacgaggacgaagaaaagggagcggtg
gtcccccctgtgcatgacatttacagagcgcggcagcagaagcggattcggtaa
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