Equus asinus (ass): 106838933
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Entry
106838933 CDS
T04645
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain precursor
KO
K06236
collagen type I alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04151
PI3K-Akt signaling pathway
eai04510
Focal adhesion
eai04512
ECM-receptor interaction
eai04518
Integrin signaling
eai04611
Platelet activation
eai04820
Cytoskeleton in muscle cells
eai04926
Relaxin signaling pathway
eai04933
AGE-RAGE signaling pathway in diabetic complications
eai04974
Protein digestion and absorption
eai05146
Amoebiasis
eai05165
Human papillomavirus infection
eai05205
Proteoglycans in cancer
eai05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106838933 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106838933 (COL1A2)
04518 Integrin signaling
106838933 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106838933 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106838933 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
106838933 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
106838933 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
106838933 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
106838933 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
106838933 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
106838933 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
106838933 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
106838933 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eai00536
]
106838933 (COL1A2)
Glycosaminoglycan binding proteins [BR:
eai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106838933 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
106838933
NCBI-ProteinID:
NP_001310709
UniProt:
B9VR89
LinkDB
All DBs
Position
1:complement(64069541..64104297)
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AA seq
1364 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEATAGKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQFDAKGGGPGPMGLMGPRGPPGASGAPGPQGFQGPAGEPGE
PGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGH
KGLDGLKGQPGAPGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGP
VGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGA
NGLTGAKGAAGLPGVAGAPGLPGPRGIPGPAGAAGATGARGLVGEPGPAGSKGESGNKGE
PGAAGPQGPPGPSGEEGKRGPNGEPGSTGPAGPPGLRGSPGSRGLPGADGRAGVMGPAGS
RGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPVGLPGIDGRPGPIGP
AGARGEPGNIGFPGPKGPTGEPGKPGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGG
KGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGARGERGPPGESGAAGP
AGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGL
RGEIGNPGRDGARGAPGAVGAPGPAGANGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGP
NGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGP
PGVTGFPGAAGRTGPPGPSGISGPPGPPGAAGKEGLRGPRGDQGPVGRAGETGASGPPGF
AGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGSLGEPGPLGIAGP
PGARGPPGAVGAPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNAGPVGAVGA
PGPHGPVGPTGKHGNRGEPGPVGSVGPVGAVGPRGPSGPQGVRGDKGEPGDKGPRGLPGI
KGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPTGPVGKDGRSGQPGTVGPAGVRGS
QGSQGPAGPPGPPGPPGPPGPSGGGYDFGYDGDFYRADQPRSPPSLRPKDYEVDATLKSL
NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGET
CIRAQPENIPAKNWYRSSKAKKHIWLGETINGGTQFEYNVEGVTTKEMATQLAFMRLLAN
HASQNITYHCKNSIAYLDEETGNLKKAVTLQGSNDVELVAEGNSRFTYTVLVDGCSRKTN
EWGKTIIEYKTNKPSRLPILDIALLDIGGADQEFGLDIGPVCFK
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatctttacaagaggcaactgcaggaaagggcccaaccggagatagaggacca
cgcggagaaaggggtccaccaggcccaccaggcagagatggtgatgatggtatcccgggc
cctcctggtccacctggtcctcctggcccccctggtcttggcgggaactttgctgctcag
tttgatgcaaaaggaggtggccctggaccaatgggtttgatgggacccagaggccctccc
ggagcatctggagcccctggccctcaaggtttccaaggacctgctggtgagcctggtgaa
cctggtcaaactggtcctgcaggtgctcggggtccacctggccctcctggcaaggctggt
gaagatggtcaccctggaaaacccggacgacctggtgagagaggagttgtcggaccacag
ggtgctcgtggtttccccggaacgcctggacttcctggcttcaagggcattaggggacac
aagggtctggatggattgaagggacagcccggtgctccaggtgtgaagggtgaacctggt
gcccctggtgaaaatggaactccaggtcaagcaggagcccgtgggcttcctggtgagaga
ggacgtgttggtgctcctggcccagctggtgcccgtggaagcgatggaagtgtgggtcct
gtgggtcctgctggccccattgggtctgctggccctccaggcttcccaggtgcccctggc
cccaagggtgaacttggacctgttggtaaccctggtcctgctggccccgcgggtccccgt
ggcgaagtgggtcttccgggtctttctggccccgttggacctcctggtaaccctggagcc
aacggccttactggtgctaagggtgccgctggcctgcccggtgttgctggggctcctggc
ctccctggaccccgtggtattcctggccctgctggtgctgctggtgctactggtgccaga
ggactcgttggtgagcctggtccagctggttccaaaggagagagtggtaacaagggtgag
cctggcgctgctgggccccaaggtcctcctggtcccagtggtgaagaaggaaagagaggc
cccaatggtgaacctggatccactggccccgcaggacctcctggactgagaggaagtcct
ggttctcgcggtcttcctggagctgacggcagagctggtgtcatgggccctgctggtagt
cgtggtgcaactggccctgctggtgtccgaggtcccaatggagattctggtcgccctgga
gagcctggcctcatgggaccccgaggtttccctggttctcctggaaatattggcccagct
ggaaaagaaggacctgtgggcctccctggtatagacggcagacctggaccaattggccca
gctggagcaagaggagagcctggcaacattggattccctggacccaagggccccacaggt
gaacctggcaaacctggtgataaaggtcatgccggtcttgctggtgctcggggtgctcca
ggtcctgatggaaacaatggtgctcagggacctcctggaccacagggtgtccaaggtgga
aaaggtgaacagggtcccgctggtcctccaggcttccaaggtctgcctggccccgcaggt
acagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaatttggtctccct
ggtcctgctggtgcaagaggggagcgtggtcccccaggtgaaagtggtgctgctggtcct
gctggtcctattggaagccgaggtccttctggacccccagggcctgatggaaacaagggt
gaacctggtgtgcttggtgctccaggcactgctggtccatctggtcctagtggactccca
ggagagaggggtgctgctggcatacctggaggcaagggagaaaagggtgagactggtctc
agaggggaaatcggtaacccaggcagagacggtgctcgaggtgctcctggtgctgtaggt
gcccctggtcctgctggagccaatggtgaccggggtgaagcgggtgctgccggtcctgct
ggtcctgctggtcctcgtggcagccctggtgaacgtggtgaagttggtcccgctggtccc
aatggatttgctggtcctgctggtgctgctggtcaacctggtgccaaaggagagagagga
accaaaggacccaagggtgaaaatggtcctgttggtcccacaggccccgttggagctgct
ggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgatggtggcccc
cctggtgttactggtttccctggtgctgctggacggactggtcctcctggaccctctggt
atctctggcccccctggtccccctggtgctgctggtaaagaaggacttcgtgggcctcgt
ggtgaccaaggtccagttggcagagcaggagaaacaggtgcatctggcccccctggcttt
gctggagagaagggtccctctggagagcctggtactgctggacctcctggcaccccaggt
cctcaaggtcttctcggcgctcccggaattctgggtctcccaggctctagaggtgaacgt
ggtctaccaggtgttgctggatctctgggtgaacctggtcctctcggcattgcaggccca
cctggggcccgtggtccccctggtgctgtgggtgcacctggagttaatggtgctcctggt
gaagctggtcgtgatggcaaccctggaagtgatggtcctccaggccgcgatggccaacct
ggacacaagggagaacgtggttaccctggcaacgctgggcccgttggtgctgtgggtgcg
cctggtcctcatggccccgtgggtcccactggcaaacatggaaaccgtggtgaacctggt
cctgttggttctgttggtcctgtcggtgccgttggtccaagaggtcctagtggcccacaa
ggtgttcgaggtgacaagggagagcctggtgataaggggcccagaggtcttcctggcata
aagggacacaatggattgcaaggtcttcctggtcttgctggtcaacacggtgatcaaggt
gctcctggctctgtgggtcccgctggtcctaggggccctgctggtcctactggccctgtc
ggcaaagatggtcgcagtggacagcctggtacagttggacctgctggtgttcgtggctct
cagggtagccaaggtcccgctggccctcctggtccccctggccctcctggccctcctggc
ccaagtggtggtggttatgactttggttatgatggagacttctacagggctgaccagcct
cgctcaccaccttctctcaggcctaaggattatgaagttgacgctactctgaaatctctc
aacaaccagatcgagacccttcttactcccgaaggctctagaaagaacccagctcgcaca
tgccgtgacttgagacttagccacccagagtggagcagcggttactactggattgaccct
aatcaaggatgcactatggatgctatcaaagtatactgtgatttctctactggtgaaacc
tgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaagttccaaggcc
aagaagcacatctggttaggagaaactatcaatggtggtacacagtttgaatataatgtt
gaaggagtaaccaccaaggaaatggctacccaacttgccttcatgcgcctgctggctaac
catgcctctcaaaacatcacctaccactgcaagaacagcattgcctacttggatgaggaa
actggcaatctgaaaaaggctgtcactctgcaaggctccaatgatgttgaacttgttgct
gagggcaacagcaggttcacttatactgttcttgtagatggctgctctagaaagacaaat
gaatggggaaagacaatcattgaatacaaaacaaataagccatctcgcctgcccatcctt
gacattgcacttttggacatcggtggcgctgaccaagaattcggtttggacattggccca
gtctgtttcaaataa
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