Equus asinus (ass): 106839714
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Entry
106839714 CDS
T04645
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04151
PI3K-Akt signaling pathway
eai04382
Cornified envelope formation
eai04510
Focal adhesion
eai04512
ECM-receptor interaction
eai04518
Integrin signaling
eai04820
Cytoskeleton in muscle cells
eai04926
Relaxin signaling pathway
eai04933
AGE-RAGE signaling pathway in diabetic complications
eai04974
Protein digestion and absorption
eai05146
Amoebiasis
eai05165
Human papillomavirus infection
eai05200
Pathways in cancer
eai05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106839714 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106839714 (COL4A6)
04518 Integrin signaling
106839714 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106839714 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106839714 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
106839714 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
106839714 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
106839714 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
106839714 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
106839714 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
106839714 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
106839714 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
106839714 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eai04147
]
106839714 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
eai00536
]
106839714 (COL4A6)
Exosome [BR:
eai04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106839714 (COL4A6)
Glycosaminoglycan binding proteins [BR:
eai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106839714 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106839714
NCBI-ProteinID:
XP_044618991
LinkDB
All DBs
Position
X:101360489..101588592
Genome browser
AA seq
1709 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKSYGKLCGGQDCSGGCKCFPEKGARGRPGPIGIQGP
TGPQGFAGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGEPVFAQGSFKGMKGDPGLPGLD
GVTGPQGAPGSPGAVGPIGPPGAQGPPGPPGFPGPDGNMGLGFQGEKGAKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLQGFPGTAGLPGLPGFGITGEKGEKGIPGLPGPRG
PMGLEGVPGPPGSQGKKGASGFPGLNGFPGIKGEKGGIGLPGPDVFIDRDGAVISVPGYP
GDPGMPGLPGLKGDEGIQGPPGPSGIPGLPALPGVPGALGPQGVPGMKGDQGNPGRTTIG
AVGLPGRDGLPGLPGLPGPPGPAFETGTLQNTEPGFPGLRGERGPKGNPGLKGVKGDSGF
CACDGGVPNTGPPGEPGLPGPPGLMGLPGLKGIRGDPGSGGARGLSGARGLFGTQGPAGP
KGEKGEPTVSTGLGMPGDQGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDDGQGFPGEK
GLPGLPGDKGHSGPTGPPGIGLPGSPGPRGLPGDQGLDGLPGQQGLPGLPGDCCCKEKVG
KGDLDTKGGITLPCIIPGPYGPSGFPGTPGFPGPKGARGLPGTPGQPGLHGNKGEPGSPG
LVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGKVGSPGLPGSKGAPGDIFGAEDGAPGE
QGLQGLPGDRGFPGDSGFPGPKGLLGKSGLLGPKGERGRPGIPGLMGQPGLPGAGGLFGI
KGKPGLPGAPGFPGTSGHPGKKGPRGETGPPASAGKRGLPGLKGFPGAPGLIGFLGNSGL
PGVTGLPGLPGLKGGKGSVGLIGFPGMPGLPGIPGASGLKGVPGSPGRVGPSGRTGSPGE
KGDRGDPGPVGLPSPRLPMLNLQFKGDKGSRGSAGSNGFPGPRGDKGVAGRPGPPGLPGP
PGFPSTIKGLIGRPGLPGPTGLRGLPGLKGSPGITGFPGIPGESGSQGLNGAPGLPGASG
LPGSKGDHGQTLGISGTPGPKGQPGETGFEGVKGKAGLVGDVGFPGNKGEDGKVGLSGDV
GLPGSPGLPGIAGMRGNPGLPGTPGHPGATGPLGPPGLVGIKGFPGLPGLHGLNGLPGTK
GTHGTPGPSITGVPGPAGLPGPKGEKGPPGISMGAPGKPGMKGQKGDRGFPGLQGSVGLP
GAPGLSLPSVIAGQPGDPGRPGLDGERGRPGPQGPRGPPGPSSDQGDPGDPGFPGIPGPQ
GPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPASWAPGETPGFRVDAGEERTERGFSGP
RGAPGQTPIAEAIQVPPGPMGLPGIDGIPGLTGDPGLQGPVGLQGSKGLPGIPGKDGPSG
LPGPPGALGDPGLPGLQGPPGFEGAPGKQGPFGRAGMPGQSVRVGYTLVKHSQSEQVPLC
PIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYAGRNDKS
YWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPRCPLGWRSLWIGYS
FLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQ
FREEPVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctgcttgttacgttgtgcctgacagaggaactggcagga
gcgggagagaagaaatcctatggaaagctatgcgggggccaagactgcagtggaggctgt
aaatgctttcctgagaaaggagcaagagggcgaccaggaccaattggaattcaaggccca
acaggtcctcaaggatttgctggcccgagtggtttatcagggttgaaaggagaaaggggc
tccccaggccctctgggaccatacggaccaaaaggagataagggtcccatgggagttcct
ggctttcttgggatcaatgggattccgggccaccccggacagccagggcccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
taccctgggcttctcggaccaccgggccttcctggtcagaagggctctaaaggtgaacct
gtctttgcccaaggtagtttcaaaggaatgaagggggatcctggactgcccggactggat
ggagtcactgggccacaaggagcacccggatctccaggagctgtaggacccataggacca
ccaggagcacaaggtcctccaggcccccccggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagccaagggggatgttggcctccctggccctgcagga
cccccaccatctactggagaactggaatttatggggtttcccaaagggaagaaaggatcc
aagggtgaaccagggcttcaaggtttcccaggaacagccggccttccaggtctcccggga
tttggaattactggagagaaaggagaaaagggaatccctggtttgccaggacctaggggt
cccatgggtttagaaggagtcccaggtcctccagggagtcagggcaagaagggggcctca
ggtttcccagggcttaatggattcccaggaattaagggtgaaaagggtggcattggtctg
ccaggccccgatgttttcattgatagagatggtgctgttatctcagtgccaggttatcct
ggagaccccggcatgccaggcctcccaggccttaaaggggatgaaggcatccagggcccg
cctggcccttctggcatccctggcttaccagctttaccaggtgtcccaggtgccctaggg
ccccagggagttccaggcatgaagggggatcaaggaaacccaggccgcaccacaattggg
gcagttggcctccctggcagagatggtttgccaggcctaccaggcctaccaggcccaccc
ggtccagcatttgagactggaaccctacagaacacagagccagggttccctggtctccga
ggagaacgaggtccaaaaggaaacccaggcctcaaaggagtaaaaggagactcaggtttt
tgtgcttgtgatggtggtgttcccaacactggaccacctggggagccaggcctgcctggg
ccaccaggtctcatgggcctcccaggccttaaaggaatcagaggagatccaggctctggg
ggagcacggggcctatcaggggctcgaggtttatttgggactcaaggtcctgcaggcccc
aaaggagagaagggagaaccaactgtcagtacaggattggggatgccaggagaccagggt
gatcctgggccccaggggctccctggtgagacaggagccccaggcaaggacggaatacca
ggtttaccaggtctgccaggccttctgggtgatgatggacagggcttcccaggtgaaaag
gggttaccaggacttcctggtgacaaaggccatagtggtccaaccggacccccaggaatt
gggctaccaggatcccctggacctcgcgggcttcctggagatcaaggactagatggattg
ccaggacaacaaggcctccccgggcttccaggtgactgctgctgcaaggagaaggttggt
aaaggagacttagacacaaagggaggtattaccttgccttgtattattcctgggccatat
ggtccatcaggattcccaggaactcccggattcccaggccctaaaggggcccgtggcctc
cctgggactccaggccagcctggattacatggaaataaaggagagcccggaagtccagga
ttggttcacctccctgaattgccaggatttcctggacctcgtggggagaagggcttgcct
gggtttcctgggctccctggaaaagatggcttgcctgggaaagttggcagtccaggttta
ccaggttccaagggagcccctggtgacatctttggtgctgaggatggtgctccgggggag
caaggcctacagggattaccaggggacagaggatttcctggagactctggctttccagga
cccaagggtttgcttgggaagtcaggcttgctaggccccaaaggtgaacggggcaggcct
ggaataccaggcctcatgggacaaccaggccttcccggggctggtggtctatttggcatc
aagggcaaacccggactcccaggagcaccaggctttccaggcacttcgggacatcctgga
aagaaaggtccaaggggcgagacaggtccccctgcatcagctggaaagagaggtctccct
gggctgaaaggctttcctggagctccagggctaattggcttcctggggaactcaggcttg
ccaggggtcactgggttgccaggcctgccaggtctgaagggtgggaaagggtctgttgga
ctgataggttttccagggatgccaggtctccctggtattcctggtgcaagtggattaaag
ggagttcctgggtcaccaggaagagtgggaccatctggacggactggtagccctggtgag
aaaggagacagaggcgacccagggcccgttggactacccagtccaagacttccaatgctg
aacctccaattcaaaggagacaaaggctctcggggctcagctggatccaacggatttcct
gggcccagaggtgacaaaggagtagctggccgtcctgggccaccaggcttacctggacct
cctggcttccccagcaccatcaagggacttattgggagaccaggcctccctggtcccaca
ggactacggggcttacctggcctgaaggggtcccctggaatcacaggtttcccaggcata
cccggagaaagtggttcacagggtctcaatggagcgcctgggctcccaggagcatctggt
ctaccaggttcaaaaggagatcacggccagacactcggaatttccggtactccaggaccc
aagggacaacctggggagactggttttgaaggtgtgaaaggaaaagctggactagtgggt
gatgtgggcttcccaggaaacaaaggtgaagatgggaaagttggtctttctggagatgtt
ggccttcctggctccccaggactccccgggattgcaggcatgagaggaaatccagggctt
ccgggtactccaggccatccaggggcaactgggcccctgggacctcctggcctagtagga
atcaaaggtttccctggacttcctggtttacatggactgaatgggcttccaggaacaaag
gggacccatggaactccaggacctagtataactggtgtgcctgggccagctggcctgcct
ggtcccaaaggggaaaaaggtcctccaggaatcagcatgggagccccagggaagccaggc
atgaaaggacaaaaaggtgaccgaggtttcccaggtctccagggctctgttggtctccct
ggggccccaggcctctccttgccctcagtcatagcaggacagcctggcgaccctgggcga
ccaggcctagatggagaacgaggccgaccaggcccccaggggccccgaggtccccctggg
ccatcctctgatcaaggcgacccgggagaccctggcttccctggaattccgggccctcaa
gggcccaagggagaccaaggaattccaggtttctctggcctccctggagagctaggactg
aaaggcatgagaggtgagcctggcttcatggggactccagcaagttgggcaccgggagag
accccaggattccgggtggatgcaggggaagaaaggacagagaggggcttttccggcccc
cgaggtgctcctggacaaacaccaattgcagaagccatccaggttcctcccgggcccatg
ggtctaccgggcattgatggcatccctggcctcacaggggaccctgggcttcaaggccct
gtaggtctacaaggctctaaaggtttacctggaatccctggcaaagatggccccagcgga
ctccccggccctcctggggctcttggtgaccctggtctccctggactgcaaggccctcca
ggatttgaaggagctccagggaagcagggccccttcgggagggctggaatgcctgggcag
agcgtgagagtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgc
cccatcgggatgagccagctgtgggtgggttacagcttgctgttcgtggaggggcaggag
aaagcccacaaccaggacctcgggtttgctggctcctgtcttccccgctttagcaccatg
cccttcatctactgcaacatcaatgaagtgtgccactatgctggacgcaacgataaatcc
tactggctctccaccaccgcccccatccccatgatgcctgtcggccagacccagattccc
cagtacatcagccgctgctctgtgtgtgaggctccctcacaagccattgctgtgcacagt
caggacatcaccatcccacggtgccccctgggttggcgcagcctctggatcgggtactcc
ttcctcatgcacactgccgctggcgccgagggcggaggccagtccctggtctcacctggc
tcctgcctagaggattttcgggccactcctttcatcgagtgcagtggtgcccgaggcacc
tgccactactttgccaacaagtacagtttctggctgacaacagtggaggagaggcagcag
tttagggaggagcctgtatccgaaacgctaaaagccgggcagctccacacccgggtcagc
cgctgccaggtgtgtatgaaaagcctgtag
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integrated database retrieval system
