Equus asinus (ass): 106840288
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Entry
106840288 CDS
T04645
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
eai
Equus asinus (ass)
Pathway
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106840288 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106840288 (DDX6)
03036 Chromosome and associated proteins [BR:
eai03036
]
106840288 (DDX6)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106840288 (DDX6)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106840288 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
106840288 (DDX6)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106840288 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
106840288
NCBI-ProteinID:
XP_044608048
UniProt:
A0A8C4L4K1
LinkDB
All DBs
Position
20:32893056..32929095
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagcggtggccctggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaacaccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatattttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagaccta
aagaaggacaatatacaagcaatggtgattgttcctactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccaca
ggaggaaccaatttacgggatgacataatgaggcttgatgacacagtgcacgtggtgata
gctacccctgggagaatcctggatcttatcaagaaaggagtagcaaaagttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacagacagattttattatattctgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcagaaaccttatgagattaacctg
atggaggaactaactttgaagggagtaacccagtactacgcatatgtaactgagcgccaa
aaagtacactgcctcaacacacttttctccaggcttcagataaaccagtcaatcattttc
tgtaactcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgtgtgtttcatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatttgtttacccgaggtattgatata
caagctgtgaatgtggtaataaactttgacttcccaaagctggcagagacctatctccat
cgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcacatat
gatgatcgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaaacctatc
ccaagtaacattgacaagagcctgtatgtggcagaataccacagtgagcctgtagaagat
gagaaaccttaa
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