Equus asinus (ass): 106840312
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Entry
106840312 CDS
T04645
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
eai
Equus asinus (ass)
Pathway
eai03008
Ribosome biogenesis in eukaryotes
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106840312 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
106840312 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eai03021
]
106840312 (XRN2)
03019 Messenger RNA biogenesis [BR:
eai03019
]
106840312 (XRN2)
03009 Ribosome biogenesis [BR:
eai03009
]
106840312 (XRN2)
03016 Transfer RNA biogenesis [BR:
eai03016
]
106840312 (XRN2)
Transcription machinery [BR:
eai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106840312 (XRN2)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
106840312 (XRN2)
Ribosome biogenesis [BR:
eai03009
]
Eukaryotic type
Pre-60S particles
RNases
106840312 (XRN2)
Transfer RNA biogenesis [BR:
eai03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
106840312 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
106840312
NCBI-ProteinID:
XP_014711181
UniProt:
A0A9L0JZC7
LinkDB
All DBs
Position
15:complement(3854901..3929001)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNASF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFIVELYQTGSTEPVGVPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLAQNAAISVNFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGVYSSAAPPPAA
YQGSLYRPLLRGHAHIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagtcgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattcctgttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaggatgaaatgatggttgca
atttttgaatacattgacagacttttcaatatagtgagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcagcgttcgaggagattcaga
gcatcaaaagaaggaatggaagcagcagtagagaaacagcgagtcagagaagaaatactg
gcaaaaggtggctttcttcctcctgaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccccgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaattatggattacattagaagacaaagagcccagcctaac
catgacccaaacactcaccattgcttatgtggagcagacgctgatctcattatgctcggc
cttgctacacatgaacccaactttaccattattagagaagaattcaaaccaaacaaaccc
aaaccatgtggtctttgtaatcagtttggacatgaggtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggagag
tttatcttccttcgtctcaatgttcttcgtgagtatttggagagagagctcaccatggcc
agcctaccgttcacatttgatgtcgagaggagcattgatgactgggtcttcatgtgcttt
tttgtgggcaatgacttccttcctcacctgccgtcattagagattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggttcacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcaccccgggtggaatattaacccct
catgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgcggatgcagaataactctagtccttcagtatctcctaatgcaagtttc
acttctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggctctgggaagctggttggaagcagcggtac
tacaagaacaaatttgacgttgatgcagctgatgagaaattccgtcgtaaagttgtacag
tcttacgttgaagggctctgctgggttcttcggtattattaccagggctgtgcttcctgg
aagtggtactatccctttcattatgcaccatttgcttcagactttgaaggtattgcagac
atgccttctgattttgagaagggtactaaaccgtttaaaccactggaacagcttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cctgattctagtataattgacttctaccccgaagattttgccattgatttaaatgggaag
aaatatgcctggcaaggtgttgctctcctgccgttcgtggatgagcggaggctgcgagct
gccctagaagaggtgtacccagacctcactccagaagagaccagaagaaacagtcttgga
ggtgacgtcttatttgtggggaaacatcacccactccacgacttcattgtagagctgtac
cagacaggttccacagagccagtgggtgtaccccctgaactatgtcatgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaaatagtgtgttctcctgttccc
atgttacgggatctggcacagaacgctgcaatcagtgttaattttaaagacccacagttt
gcggaagattacatttttaaagctgtaatgcttccaggagcaagaaaaccagcaccagtg
ttgaaacctagtgactgggaaaaatccagcaacggacggcagtggaagccccagcttggc
tttaatcgggacaggcggcctgtccacctggatcaggcggcgttcaggactttggggcat
gttatgccgagaggctcaggaactggggtttacagcagtgccgcaccaccacctgcggct
taccaggggagcttatacaggccgctgctgagaggccacgcccacattccaaaacttatg
tcaaacatgaggccccaggattcctggcgagggcctcctccccttttccagcagcagaga
tttgacagaggcgttggggctgaacctctgctgccatggaaccggatgctccaaacccaa
aatgcagccttccagccaaaccagtaccagatgctagccggacccggcgggtatccaccg
agacgtgatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccttcaggaagatacagttggaattag
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