Equus asinus (ass): 106841016
Help
Entry
106841016 CDS
T04645
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
eai
Equus asinus (ass)
Pathway
eai03440
Homologous recombination
eai03450
Non-homologous end-joining
eai04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106841016 (RAD50)
03450 Non-homologous end-joining
106841016 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106841016 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eai03032
]
106841016 (RAD50)
03400 DNA repair and recombination proteins [BR:
eai03400
]
106841016 (RAD50)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106841016 (RAD50)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106841016 (RAD50)
BRCA1-C complex
106841016 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
106841016 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
106841016
NCBI-ProteinID:
XP_014712259
UniProt:
A0A8C4MIR4
LinkDB
All DBs
Position
12:11241319..11310498
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESGLLNREKSELLVEQGRLQLQEDRH
QEHIRARDSLIQSLASQLELDGFERGPFSERQIKNFHKLVRERQEREAETASHLMNDFAE
KESLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVEMLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLARLNKE
LASAEQNKNHINIEIKRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDVEEQETLLGVIMP
EEESAKVCLTDVSIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKFIQDQQEQIQYLKSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVSPLETTLEKFQQEKEELINKKNSSNKIAQDKMNDIKEKVKNIHNYVKD
IENYIQDGKDDYKKQKEDELNKVIAQLSECEKHKEKINTDMRIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKHHLKEMGQMQVLQMKNEHQELEEKIDNVKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSAADKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagccccctcacgattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtttaaaatatatttgtactggagatttccctcccgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggcgaaaaggtcagtctcagctctaaatgtgccgaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttctgtcaccaagaa
gagtctaattggcctttaagtgaaggaaaggctttgaagcagaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactcaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgagatcagattactagtaaggaagcccagttaacatcttcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccgttgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgaacaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaagtggaaaaattaaataaagaatctgggcttctcaat
cgagaaaagtcagaactacttgttgaacaaggtcgtctacagctacaggaagatcgtcat
caagaacatatccgagctagagattcattaattcagtctttggcatcacagctagaatta
gatggatttgaacgtggaccattcagtgaaagacagattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaactgccagccacctaatgaatgactttgcagaa
aaagagagtctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgaactaaaatcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aagtacgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaaatgtta
aaaacagaagtgataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ctggatcaggagatggagcaattaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacttcattgttagggtattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagagacagacttgccagattgaacaaggaa
ctggcttcagctgagcaaaataaaaatcatataaatattgaaataaaaaggaaggaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgatagt
gatttggatagacttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggatgaaaaccagtcatgt
tgccccgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgagatgaaatgctgggacttgtgcccgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgttaacagagac
atacagcgcctaaagaatgatgtggaagaacaggaaacactcttgggtgtaataatgcct
gaagaagaaagtgctaaagtttgtctgacagatgtttcaattatggagagattccagatg
gagcttaaagacgttgaaagaaaaattgcacaacaagcagctaagctacaaggactagac
ttggatagaactgttcaacaagtaaatcaggaaaagcaagaaaaacaacacaaattagat
acagtttccagtaaaattgaattgaatcgtaagtttatacaggatcagcaggaacagatt
caatacctaaaaagtataacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttatacagagagataaaggatgctaaagagcaggtaagccctttggaaacaacattggaa
aagttccagcaggaaaaagaagaattaatcaacaaaaaaaattcaagcaacaaaatagca
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcataattatgtgaaagac
attgaaaattatattcaagatgggaaagacgactataagaagcaaaaagaagatgaactt
aataaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaagataaatacggat
atgcgaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaggat
aacctcactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacac
catttgaaggaaatgggtcaaatgcaagttttacaaatgaaaaatgaacatcaggagttg
gaagaaaaaatagacaatgtaaaaagaaatcacagtttggcaatagggcgacagaagggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtatagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcatagtatgaaaatg
gaagaaatcaataaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtcggatgctgacgaaaatgtatcagctgctgataaaaggcgg
aattacaattaccgagtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcattattcgcctggctctggctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacaacagcgc
aacttccagcttctggtaatcactcatgatgaagatttcgtggagctcttagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgta
aaatgcagtgttagctccctgggatcttatgttcattaa
DBGET
integrated database retrieval system
