Equus asinus (ass): 106841648
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Entry
106841648 CDS
T04645
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
eai
Equus asinus (ass)
Pathway
eai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106841648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106841648
Transcription factors [BR:
eai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106841648
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
106841648
NCBI-ProteinID:
XP_014713234
UniProt:
A0A9L0K772
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Position
12:84693906..84696302
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AA seq
406 aa
AA seq
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MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYAQASDYGVPPEPPAGPMHPRLGPETAGSAMPGLLAPPSALHMYYGAM
GSPAAGGGRSFQMQPQQHPPGPGQPSPPPEALPCRDGADPSQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagacccggagcgcgctg
cccgcggtgatggccgggctgggcccttgcccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagcggggcgcccgccggggccgcgggt
cgagccaagggcgagtctcgcatccggcggccgatgaatgccttcatggtgtgggctaag
gacgagcgcaagcgcctggcgcagcagaacccagacctgcacaacgctgagttgagcaag
atgctgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccatcccaactacaaataccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggattcctgcacggcctcgcc
gagccgcaggcggctgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttcccggagcagggcttccccgcgggcccgccgttgctgcccccgcacatgggc
ggccactaccgtgactgccagggcctgggcgcacccccgctcgacggctaccctctgccc
acgcccgacacctcccctctggacggcgtggagccggatccggccttcttcgccgcgccg
ctgcccggggactgtccagcggccggcccctacagctatgcgcaggcctcggactacggg
gtgcccccggagccacccgccggccccatgcacccccggctcggccccgagacggcgggc
tctgcaatgccgggcctcctggcgccccccagcgctctgcacatgtactatggcgcgatg
ggctcgccggcggcggggggcgggcgcagcttccagatgcagccgcagcagcacccgccg
ggcccggggcagccgtcgccccctcctgaggcgctgccctgccgggatggcgcggacccg
agccagcccgctgagctcctcggggaggtggaccgcacggaatttgaacagtatctgcac
ttcgtgtgcaagcccgagatgggtctcccctaccaaggacatgactctagtgtgaatctc
cccgacagccacggggccatttcctcggtggtgtcggatgccagctctgcggtatattac
tgcaactatcctgacgtttga
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