Equus asinus (ass): 106841688
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Entry
106841688 CDS
T04645
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
eai
Equus asinus (ass)
Pathway
eai03020
RNA polymerase
eai03420
Nucleotide excision repair
eai05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106841688 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
106841688 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
106841688 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eai03021
]
106841688 (POLR2B)
03400 DNA repair and recombination proteins [BR:
eai03400
]
106841688 (POLR2B)
Enzymes [BR:
eai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106841688 (POLR2B)
Transcription machinery [BR:
eai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106841688 (POLR2B)
DNA repair and recombination proteins [BR:
eai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106841688 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106841688
NCBI-ProteinID:
XP_014713320
LinkDB
All DBs
Position
3:141726202..141781244
Genome browser
AA seq
1275 aa
AA seq
DB search
MSKASESASNSKAASSFCSSEYENVLPTLPRTRYTEVISHSFKAFDSRQAQILYCLWRET
QSILGTPETEITSSNARRSGGCSAAFSLWLQELGAREPFANMYDADEDMQYDEDDDEITP
DLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVE
EPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQ
LQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEK
MATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVAT
LPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALN
FIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGR
RELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRI
ISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPR
QLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPA
AIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAG
RICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTP
DDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITN
FHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRS
AVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVR
VSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFC
KIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIG
HLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITS
QIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGA
AQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLF
QELMSMSIAPRMMSV
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggcaagtgaatcagcatcaaactcgaaggcagcttcatccttctgttcttct
gaatacgagaatgttcttccaactcttcctagaacaagatatactgaagttattagtcac
tcttttaaagcttttgactccagacaggcgcagatcttatattgcctttggcgtgagacg
cagagtattctgggaacgccggagacggaaatcacttcgtctaacgctcggagaagtggt
ggctgctcagcggctttctctctgtggcttcaagagttaggagctcgggaaccgtttgcc
aatatgtatgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcacccca
gatttgtggcaagaagcttgctggattgtaatcagttcttattttgacgagaaaggcttg
gtcagacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtg
gaagatgctccacctatagacctgcaagctgaagctcagcatgccagtggggaagttgaa
gaaccgccaagatatttgctgaagtttgaacaaatttacctctctaagcctacccattgg
gaaagagatggtgctccttcaccaatgatgccaaatgaggccagattaagaaatctcacg
tattctgctccactttatgttgatataacaaaaacagtcattaaagaaggtgaagaacaa
cttcagactcagcatcagaagacttttataggaaaaattccaattatgttgcgttcaact
tactgcctgttgaatggcttaacagatcgtgatctttgtgagttaaacgaatgccctctg
gatcctggtggctacttcattattaatggatcagaaaaggttctgattgctcaagagaaa
atggcaacaaacacagtgtatgtgtttgccaaaaaggattctaaatatgcctacacggga
gagtgtagatcatgtctggagaattcttcccgacccaccagtactatttgggttagcatg
ctggcaagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggcaact
ctaccatatatcaagcaagaagttcctatcattattgtgttcagagcattaggttttgtg
tctgacagagatattttagagcatattatttatgattttgaagatccagagatgatggaa
atggttaaaccttctctcgatgaagcttttgtcattcaagaacagaatgttgcactaaat
ttcattggctcaagaggggcaaagcctggagtcaccaaagagaaaagaattaaatatgca
aaagaggtcttacaaaaagaaatgctccctcatgttggcgtcagtgatttttgtgagacc
aaaaaagcctatttcttggggtacatggttcataggttgcttctagcagcattgggtaga
agagaattagatgacagagaccactatggaaacaaaagattggatcttgctgggccgcta
cttgcattcttatttagaggtatgtttaagaatttgctgaaagaagtgcggatctatgca
cagaagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggatt
atatctgatggcctaaaatattctttagctactggaaactggggtgaccaaaagaaagct
catcaagccagagctggagtatctcaggtattaaaccgcctgacttttgcgtccactctt
tctcacctgcgtcgtttaaattctccgattggtagagatggcaagctggccaaaccaaga
cagttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgct
gtaggacttgtgaagaatttagctctgatggcttatatttcagttggatctcaaccttct
ccaattctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgca
gctattgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagat
cctgaacaacttatgaacactctaaggaaattacggcgtcagatggacatcattgtgtct
gaagtttctatgatcagagatattcgagagagggagattcggatctatacagatgcaggc
cggatttgtagaccacttctgattgtggaaaaacaaaagctacttttgaagaagagacat
attgatcaattgaaagagagagagtataacaactacagttggcaagatcttgtggccagt
ggggtagtagaatatattgatactctagaagaagaaacagtaatgcttgcgatgactccg
gatgatttacaggagaaagaagtagcttattgttccacatacacacactgtgagattcat
ccgtcaatgattcttggcgtctgtgcatctattattccctttcctgatcataaccagtcc
cctagaaatacataccagtctgctatgggtaagcaggctatgggagtttatatcactaac
ttccatgtccgtatggatacgttggcccatgttctttattatcctcaaaaaccacttgtg
actacacggtctatggaatatctacgatttagagagctgcccgcaggtatcaactcaatt
gtggccattgcatcgtacactgggtataatcaagaagactctgttatcatgaatcgctca
gctgtagaccgaggctttttcaggtctgttttctatcgatcatacaaagaacaggagtct
aaaaaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacatgccagggt
atgaggcatgccatctatgacaagctggatgatgatggtttgatagcccctggggttcgt
gtatcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaa
ttggagagcaccaataggcgctataccaagagagactgtagtacttttctcagaactagt
gagactggcattgtggatcaggttatggtaactctcaaccaggaaggatataaattttgt
aaaatcagggtgcgctctgttagaattccacagattggagacaaatttgctagccgacat
ggtcaaaagggtacttgtggtattcagtatagacaggaggatatgcctttcacctgtgaa
ggtatcacccctgatatcatcattaatccccatgccatcccctctcgtatgactattggt
cacttgattgagtgtcttcaagggaaggtatcagctaacaagggtgaaattggtgatgcc
actccatttaatgatgctgttaatgtgcaaaagatttctaatcttttatcagattatggt
taccatctcagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatca
caaatttttattggccccacttattaccagcgtttgaagcatatggtggatgataagatt
cattctcgtgctagggggcctattcagatccttaacagacagcccatggagggtagatct
cgtgatggtggcctgcgttttggagaaatggaacgagattgtcagattgcccatggagca
gcccagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcacgtttgc
aatctttgtggaataatggcgattgctaacacaaggacccatacgtacgagtgcaggggt
tgccgaaataaaacccagatttctttggtgcgaatgccttatgcgtgcaaactcttgttt
caagaacttatgtctatgagtattgcacctcgaatgatgagcgtttaa
DBGET
integrated database retrieval system
