Equus asinus (ass): 106842338
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Entry
106842338 CDS
T04645
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eai03009
]
106842338 (DDX55)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106842338 (DDX55)
Ribosome biogenesis [BR:
eai03009
]
Eukaryotic type
Pre-60S particles
Helicases
106842338 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106842338
NCBI-ProteinID:
XP_014714295
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All DBs
Position
8:48004858..48020483
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AA seq
599 aa
AA seq
DB search
MEHVTEGSWESLPVPLHPGVLGVLQELGFPYMTPVQSATIPLFLKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTQPFPQFSQILWIGG
RNPGEDVARFKEQGGNIIVATPGRLEDMFRRKAEGLDLASCVRALDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGLAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKSVKIMCIH
GKMKYKRNKIFMEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKLQKNTMDLLPKLQSMALADRAVFEK
GMKAFVSYVQAYAKHECSLIFRLKDLDFARLARGFALLRMPKMPELRGKQFPDFVPVDVN
TDTIPFKDKIREKQRQKLLEQQRKEKTANEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSGKRRAKTADLGISDSEDC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggaggggtcctgggagtcgctgccggtgccgctgcacccgggggtg
ctgggtgtgctgcaggagctgggtttcccgtacatgacgccggtgcagtctgcaaccatc
cctctgttcctgaaaaacaaagacgttgctgcagaagcggtcacaggtagtggcaaaacc
ctcgcttttgtcatccccatcctggagattcttctgagaagggaagagaagttaaaaaag
agtcaggtgggagccatcatcatcacgcccacgcgagagctggctattcagatagatgag
gtcctgtcgcatttcacgcagcccttcccgcagttcagccagattctctggattggaggc
aggaatcctggagaagatgttgcgaggtttaaggaacagggtgggaacatcatcgtggcg
actccaggccgcttggaggacatgttccgcaggaaggccgagggcctggatctggccagc
tgtgtgcgggcccttgatgtcctggttttggatgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaaccggcctt
ttctctgccactcagacgcaggaagtggagaacctggtgagagccggcctccggaaccct
gtccgcatctccgtgaaggagaagggcctggccgccagcagcacccagaagaccccctcc
cgcctggagaactactacatggtatgtaaagcagatgagaaatttaatcagctggtacat
tttcttcgcaatcataagcaggaaaaacacctggtcttcttcagcacctgcgcctgtgtg
gagtactacggcaaggctctggaggccctggtgaagagcgtgaagataatgtgcatccac
ggaaagatgaaatacaagcgcaataagatcttcatggagttccgaaaactgccgagtggg
attttagtgtgtaccgatgtcatggcccgaggaatagacattcccgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgccagtgcttttgtgcatcgctgtggccgcacagcc
cgcattggccatggcggcagtgcgctcgtgttcctccttcccatggaagagtcatacatc
aatttccttgcaatcaaccagaaatgccccctgcaggagatgaaactccagaaaaacaca
atggaccttcttccaaagctccagtccatggccctggccgacagagctgtgtttgaaaag
ggcatgaaagctttcgtgtcatacgtccaggcttatgcgaagcatgaatgcagcctcatc
ttcagattaaaggatcttgattttgctcgtcttgctcgagggtttgctctgctgaggatg
cccaagatgccagaactgagaggaaagcagtttccagattttgtgcctgtggacgttaac
acagacaccattccctttaaagacaaaatcagagaaaagcagaggcagaaactactggag
caacaaagaaaagagaagacagcaaatgaagggagaagaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggaaaagaagaaaaaaatgaatgaaaaaaggaaaaga
gaagagggctcggatattgaagacgaggacatggaggaacttctgaatgacacaaggctc
ttgaaaaagtttaaaaagggcaaaattactgaagaagaatttgagaaggggttgttgaca
agtggcaaaagaagagctaagacagcagatttggggatctcagattctgaggactgctga
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