Equus asinus (ass): 106842850
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Entry
106842850 CDS
T04645
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eai04040
]
106842850 (SCN11A)
Ion channels [BR:
eai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106842850 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
106842850
NCBI-ProteinID:
XP_014715082
LinkDB
All DBs
Position
21:complement(50388190..50472801)
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AA seq
1781 aa
AA seq
DB search
MDNLCYPVIFPGARNFRPFTSDSLAAIEKRIAIQKEKKKSKDQTAAEPQPRPQLDLKVSR
KLPKLYGDIPKELIAKPLEDLDPFYKNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRG
LAIRISVHSLFSMFIICTVIINCVFMATASEKDRSNKDADNAEYVFTGIYIFEALIKILA
RGFVLDEFSFLRDPWNWLDSIVIATAFVSYSPNKFSGISLSSLRTFRVFRALKAISVVSG
LKVIVGALLRSVRKLVNVMILTLFCLSIFALVGQQLFMGNLSQRCVKKSCKNSSNLDDSC
FEKKNPTEFRMCGSWKGSSACSEDFECRHTDDNPDHNFTKFDNFGWSFLAMFRLMTQDSW
EKLYQQTLVTSGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKMF
QEAQQLLKKEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNKKRKSFFLRDSGKEKFPG
TDSDEDSQKKPHLLEQTKRLSQNLSLDHGDERGDPIQRQRALSAVSILTITVQELEKSQE
PCLPCGENLASKYLVWDCSPQWLRIKKALKTMMTDPFTELAVTICIIINTVFLAMEHYNM
DPTFETMLNTGNLVFTGVFMAEMFLKIIALDPYHYFRRGWNIFDSVVALLSFADVMNSIV
AGKQKWPFFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGM
QLFGSKFGYEKRNTKSCIPTVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQVADP
SLCIIVFLLIMVIGKLVVLNLFIALLLNSFSSEERGGSLEGQTRKTEVQLALDRFRRAFY
FVLHNLEHFCHKWYRRQNLPEQKEVTGGSAAESKDIIPLVTEMKKGPDTWEEFGILISAP
KTLSVEYDRTWLAPLAEEEDDDVECPDENNAQPFTQPEAGKQASELHQETKKSSSPGVQS
VEIDVFSEDGASLLEQNSRKKSDATSVFSECSTIDPQDPFGQVPEMVPKKTPGRCLPKVL
SCCFPCCAMVKRKSSWITWWNLRKTCYQIVKHGWFESFIIFVILLSSGALVFEDIHLTNK
PNIQALLNYTDSVFTYIFILEMGLKWVAFGFGKYFSSAWCWLDFVIVIVSVASLLDLNVS
KSFRTLRALRPLRALSQFEGMKVVVNALMGAIPAILNVLLVCLIFWLIFCILGVNFFCGK
FGRCVNGTEISTINYSFITNITHCKSENFSWVTPKVNFDNVGMAYLALLQVATFKGWMEI
MYAAVDSTKEWEQPKFEHNKYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQRKISGQD
IFMTEEQRKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTNQVFDIVIIILILLNMLT
MMAESHNQSEEKRLILEHLNLTFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVLLSLV
STMVSTLEKQEHIRFPPTLFRIVRLVRIGRVLRLVRAARGIRTLLFALMMSLPSLFNIGL
LLFLIMFIYAIFGMSCFGKVRLSGIDDIFNFETFVGSMLCLFQITTSAGWDALLSPMLQS
KDSCKTNSENCHLSTIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDF
EMFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCL
DILFAFTTRVLGDSNGLDSMKVMMEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKA
FRKYMLKITKCALEDRPPSPFQMLCNGDLSNSASKGKVHYD
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggacaacttgtgctacccggtgatcttcccaggtgcacggaatttccgccccttcact
tctgactctctggctgcaattgagaagcggattgccatccaaaaggagaaaaagaagtcc
aaagaccagacagcggcagaaccccagcctcgacctcagcttgacctaaaggtctccagg
aagttgcccaagctctatggcgacattcccaaagagctgatagcaaagcccctggaagac
ttggacccattctacaaaaatcataagacattcatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaaacgtgccttgttcatttttgggcctttcaattcaatccgaggc
ttagccattagaatctcagtccattcattgttcagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccacagctagtgagaaggacaggagtaataaggatgccgac
aatgccgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttgttctggatgagttttctttccttcgagatccatggaactggctggactcc
attgtcattgcaacagcgtttgtgtcatattcgccaaataagttcagtgggatcagtctg
tcatccctgcgtacctttagagtgttcagagcgttgaaggcaatttcagtagtttcgggt
ttgaaggtcattgttggggccttgctgcgctctgtgaggaagcttgtcaatgtgatgatc
ctgactctcttttgcctcagcattttcgccctggtaggtcagcagctcttcatgggaaat
ttgagccagagatgtgtcaagaagtcctgtaagaattccagtaaccttgatgactcttgc
tttgaaaagaaaaatcccactgaattcagaatgtgtggctcctggaagggtagcagtgcc
tgttctgaagactttgaatgcagacacacagatgacaatcctgaccataattttacaaag
tttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcgtgg
gagaagctttatcaacagactttggttacctcggggctctactcagtcttcttctttgtg
gtggtcatcttcctgggctctttctacctgattaacttaactctggctgttgtcaccatg
gcttacgaggaacagaacaggaatgtagctgctgagacagaggccaaggagaaaatgttc
caggaagcccagcagctgttaaagaaagagaaggaggctctggttgccatgggaattgac
agaagttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctattt
ggtaataagaaaaggaaatccttctttttgagagactctgggaaagagaagtttccagga
acagattctgatgaagattcccaaaaaaagccacacctcctagaacaaaccaaacgactg
tcccagaatctgtcactggaccatggtgatgagcgtggagaccccatccaaaggcagagg
gcgctgagtgctgtcagtatcctcaccatcactgtgcaggaactagaaaaatcccaggaa
ccttgcctcccatgtggggaaaacctggcatccaaatacctcgtgtgggactgcagcccc
cagtggcttcgtattaagaaggccctgaaaaccatgatgactgacccctttactgagctg
gccgtcaccatctgcatcataatcaacactgtcttcttggccatggagcattacaacatg
gacccgacttttgagacgatgttgaatacagggaatttggttttcactggcgtttttatg
gcagaaatgttccttaaaatcatcgcgcttgatccctaccactactttcgccgaggctgg
aacatttttgacagtgtcgtcgctcttctgagttttgcagatgtgatgaatagtatagtt
gcaggaaaacaaaaatggccatttttccgttccttaagagtgctgagggtcttcaagtta
gccaaatcctggccaactttaaacacactgattaagataattggccactccgttggagcc
cttggaaacctgactgtggtcctggccattgtggtctttattttctcggttgttggcatg
cagctttttggctctaaattcggttatgaaaaaagaaatacaaaatcctgtattcctaca
gtcccatgtttacgacgctggcacatgggggatttctaccactcctttctggtggtattc
cgcatcctctgtggggaatggattgaaaacatgtgggaatgcatgcaagtagctgatccg
tcactgtgcattattgtctttctgttgatcatggtgataggaaaactcgtggtactcaat
ctcttcattgccttgctgctcaattccttcagcagtgaggagagaggtggaagcttggaa
ggacagaccaggaaaaccgaagtccagttagccctggatcggttccgccgggctttttat
tttgtgttacataatcttgagcatttttgtcacaagtggtacaggaggcaaaacttacca
gagcaaaaagaggtgacaggaggctctgctgcagagagcaaagacatcatccccctggtc
acagagatgaaaaagggcccagacacgtgggaagagtttggtatactaatttctgcacca
aagaccttgagtgttgagtatgatcggacttggttggccccacttgctgaagaggaagat
gatgatgttgaatgtcctgatgaaaataatgcacaacctttcacacaacctgaggctgga
aaacaggcctctgaactccaccaggagaccaagaagtccagcagcccaggagttcaaagt
gtggaaattgacgtgttctctgaagatggtgcttctctgttagaacaaaattcccgaaag
aagtctgatgctaccagtgtgttctcagaatgtagcaccattgatccacaggatcccttt
gggcaggtacctgaaatggttcccaaaaaaaccccagggagatgtttgcccaaagtccta
agttgctgcttcccatgctgtgctatggtcaagaggaagtcttcctggatcacttggtgg
aacctgcggaaaacctgctaccaaatagtgaaacacggctggtttgagagttttattatc
tttgtgattctgctgagcagcggggcactggtatttgaagatattcaccttactaacaaa
cccaatattcaagcattacttaattatactgacagtgttttcacatacatttttatcctc
gagatgggtctgaaatgggtggcctttggatttgggaagtatttctccagtgcctggtgc
tggctcgatttcgtcattgtgattgtctctgtggccagtctccttgacttaaacgtctca
aagtccttccggactctccgagcactgaggcccctgcgagcgctgtcccagtttgaagga
atgaaggtggtagttaatgctctcatgggtgccatacctgccattctgaatgttttgctt
gtctgcctcattttctggctcatattttgtatcctgggagtaaacttcttttgtggaaaa
tttggaagatgcgttaatggaacagaaatatcaactataaattacagcttcattacaaac
ataacccactgtaaaagtgaaaatttctcctgggtcaccccaaaagtcaactttgacaat
gtgggaatggcttacctcgccctgctgcaagtggcaacatttaagggctggatggaaatt
atgtatgcagctgttgattccacaaaggaatgggagcagccaaagtttgagcacaacaaa
tacatgtacctttacttcgtagtttttatcatctttggttcattcttcactctgaatctc
tttattggtgttattattgacaacttcaaccaacagcaaagaaagataagtggccaagac
atttttatgacagaagaacagaggaaatactataatgcaatgaaaaaattaggatccaaa
aaacctcagaagcccattccaaggccactgaacaaatgccagggacttgtgtttgacctg
gtcacaaaccaggtctttgacatcgtcatcatcatcctcattctcctcaacatgcttacc
atgatggctgaatcacataaccagtcagaagagaaaagactcatcctcgagcatctcaac
ctgacctttgtggtcatctttacaattgagtgtctcatcaaaatctttgctctgaggcaa
tactacttcaccaatggctggaatttatttgattgtgtgattgtgctcctttctcttgtt
agtacaatggtttccaccttagaaaaacaggagcacattcgttttcctccaacactcttc
agaattgtccgcttggttcggattggccgagtcctgagacttgttcgggcagcacgagga
attaggactctcctttttgctctgatgatgtcccttccctctctattcaacatcggtctt
ctactctttttgattatgtttatttatgccatttttggtatgagctgttttggcaaagtg
aggctgtctggaattgatgacatcttcaacttcgaaacttttgtaggcagcatgctgtgt
ctcttccagataaccacgtcagcaggctgggatgccctcctcagccccatgctgcaatca
aaagattcatgtaaaaccaactcagagaactgtcacctctctaccatagccataacctac
ttcgtcagttacattatcatctcctttctcattgttgtcaacatgtatattgctgtgatt
ttagagaacttcaatacagccactgaagaaagtgaggaccctttgggtgaagatgacttt
gaaatgttctatgaagtctgggaaaagtttgacccagaagcaacacagtttatcaaatat
tctgccctttctgactttgcagatgcccttcccgagcctttgcgtgtggcaaagccaaat
aaatttcaatttctagtaatggatttgcccatggtgagtggagatcgcctccactgcctg
gatattctctttgctttcaccactagggtacttggtgattccaatggcctggacagcatg
aaagtaatgatggaggagaagttcatggaagccaaccctttcaagaagttatatgaaccc
atagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgttattcaaaaggcc
tttcgaaagtacatgctgaagataaccaagtgtgctttggaagacaggcccccttcacca
ttccaaatgctctgcaatggggacttgtccaactctgcctccaagggcaaggtacactac
gactga
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