Equus asinus (ass): 106842898
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Entry
106842898 CDS
T04645
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106842898 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106842898 (CSTF2)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106842898 (CSTF2)
U7-dependent histone pre-mRNA processing factors
106842898 (CSTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
106842898
NCBI-ProteinID:
XP_044620251
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Position
X
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AA seq
597 aa
AA seq
DB search
MAGLTARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQPVHSTGPGSGSNVSMNQQNPQAPQAQSLGGMHVN
GAPPLMQASMQAGVPTPGQMPASVTGPGPGALAPGGGMQAQVGMPGSGPVSMERGQGTLQ
HSPVGPAGPASIERVQVPMQDPRAAMQRGPLPANVPTPRGLLGDAPNDPRGGTLLSVTGE
VEPRGYLGPPHQGPPMHHVPGHDSRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPPLD
GRGGRDPRGMDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGM
EARSMDTRGPVPGPRGPIPSGIQGPSPINMGAVGPQGSRQVPVMQGAAMQGASIQGGGQP
GGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgcgagggaccctgcggtggatcgttctctgcgttcggtgttcgtg
gggaacattccatatgaggctactgaagagcagttaaaggacatcttttctgaggttgga
cctgttgttagtttcagattggtatatgatagggagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaagagacggctcttagtgccatgcgaaacctgaatgggcgt
gaattcagcgggagagcacttcgagtggacaatgctgccagtgaaaagaacaaagaagaa
ctaaagagccttggcactggtgcccctgtcattgaatcaccctatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctctgtgttcagaacagtccccaggaagcacggaac
atgttacttcagaaccctcaactggcttatgctttgctacaagcacaggtagtgatgaga
attgtggatccagagattgccctgaaaattctgcatcgccagacaaatatcccaacgctg
attgctggcaaccctcagccagtccacagcactgggcctggctcaggatccaatgtgtca
atgaaccagcagaatcctcaggcccctcaagcccagtctttgggtggaatgcacgtcaat
ggtgcacctcctcttatgcaggcttctatgcaagctggagttccaacaccagggcaaatg
ccagcatctgtgacaggacctggccctggtgccttagctcctggaggaggaatgcaggcc
caagttggaatgccaggaagtggaccagtgtccatggagcggggacaaggaaccctacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagtgccgatgcaa
gaccccagagcagcgatgcagcgtgggcccttgcctgccaacgtcccaactcctcggggt
ctgttaggagacgctccgaatgacccacgtggaggcactttactttctgtgactggagaa
gtggaacctagaggttacctgggaccacctcatcagggtccacccatgcaccatgtccct
ggccatgacagccgtggcccacccccacatgagatgaggggagggccattagccgagccc
agacctctaatggcagaaccaagaggacccatgctagatcagaggggtccacccttggat
ggcagaggtggaagagatccccgaggcatggatgcacgagggatggaggcacgagccatg
gaggcaagaggattagatgccagaggtttggaggcccgtgcaatggaagcccgcgcaatg
gaggcccgtgcaatggaggcccgtgcaatggaggcccgtgcaatggaagtcagagggatg
gaggccagaagcatggatacaaggggcccagtgcctggccctagaggccctatacctagt
ggaattcagggtcccagtccaattaacatgggggcagttggaccccagggatccagacag
gtcccagtcatgcagggagcagccatgcaaggagcaagcattcagggtggaggccagcct
ggtggctttagtcctggccagaaccaagtcactccacaggaccatgagaaagctgctttg
atcatgcaggttcttcaactgactgcagaccagatcgccatgctgcctcctgagcaaagg
cagagtatcctgatcttaaaggaacagatacagaaatccactggagcgccttga
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