Equus asinus (ass): 106842984
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Entry
106842984 CDS
T04645
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04151
PI3K-Akt signaling pathway
eai04510
Focal adhesion
eai04512
ECM-receptor interaction
eai04820
Cytoskeleton in muscle cells
eai04974
Protein digestion and absorption
eai05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
106842984 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106842984 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106842984 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106842984 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106842984 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
106842984 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eai04147
]
106842984 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
eai00536
]
106842984 (COL6A2)
Exosome [BR:
eai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106842984 (COL6A2)
Glycosaminoglycan binding proteins [BR:
eai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106842984 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
106842984 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
106842984
NCBI-ProteinID:
XP_044606718
LinkDB
All DBs
Position
18:complement(6638331..6671777)
Genome browser
AA seq
1023 aa
AA seq
DB search
MLRGPCSALLLWGLLGTLHAQQQEVIAPDPSERNSNCPEKADCPVNVYFVLDTSESVTMQ
SPTDSLLYHMQQFVPQFISQLQDEFYLDQVALSWRYGGLHFSDQVEVFSPPNSDRASFIK
SLQSISSFRRGTFTDCALANMTQEIRRHVKKGVNFAVVITDGHVTGSPCGGIKRQAEKAR
EEGIRLFAVAPNRNLHEQGLRDIASTPLELYRSNYATMRPDSTDIDQDTINRIIKVMKHE
AYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKG
VPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYVGEAG
SPGEQGDQGAKGDPGRPGRRGPPGEDGAKGSKGYQGNNGSPGSPGVKGAKGGPGPRGPKG
EPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGALG
EPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGEPGEDRGTPPPGSPVRLSQ
GGRGDFGMKGAPGRKGQKGEPADPGPPGEPGPRGPRGEPGLEGEPGPPGDPGLTECDVMT
YVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSET
GTRVGVVQYSHEGTFEAIQLDDERINSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIK
ESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNHDVTVTAIGIGDMFHERHESENLYSIA
CDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPVDIVF
LLDGSERLGEQNFHKARRFVEEVSRRLTLARREDDPLNARVALLQFGGRDEQQVAFPLTS
NLTAIHEALASARYLNSFSHVGAGIVHAINYVVQDARAGARRHAELAFVFLTDGVTGNDS
LEEAVHSMRKQNVVPTVVAVGSDVDADVLSKISLGDAAAVFREKDYDSLAQPSFFDRFIR
WIC
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaggcccctgctccgccctcctgctctgggggctcctggggaccctccacgcc
cagcagcaggaggtcatcgcacctgacccctcggagagaaacagtaactgcccagagaaa
gccgactgccccgtcaacgtgtacttcgtgctggacacctcggagagcgtcaccatgcag
tcgcccaccgacagcctgctctaccacatgcagcagttcgtgccgcagttcatcagccag
ctgcaggacgagttctacctggaccaggtggccctgagctggcgctacggcggcctgcac
ttctccgaccaggtggaggtgttcagcccgccgaacagcgaccgcgcctccttcatcaag
agcctgcagagcatcagctccttccgccgcggcaccttcaccgactgcgcgctggccaac
atgacccaggagatccggcggcacgtgaaaaagggggtcaacttcgcggtggtcatcacc
gacggccacgtcaccggcagcccgtgcgggggcatcaagcggcaggccgagaaggcacgc
gaggaaggcatccggctcttcgccgtggcccccaatcggaacctgcacgagcagggcctg
cgggacatcgccagcacgcccctggagctgtaccgcagcaactacgccaccatgcggccc
gactccaccgacatcgaccaggacaccatcaaccgcatcatcaaggtcatgaaacacgaa
gcttatggagagtgctacaaagtgagctgtctggagatccctgggccacctggccccaag
ggctaccgcggacagaagggcgccaagggcaacatgggtgagccgggagagcctggacag
aagggacgacagggagatccaggcatcgaaggccccattggattcccaggacccaagggt
gttcctggtttcaaaggagagaagggagaatttggagctgacgggcggaagggcgcccct
ggcctggccggcaagaatgggaccgatggacagaagggcaagctggggcgcatcgggcct
cctggctgcaagggagaccctgggaaccggggccccgacgggtacgtgggggaagcaggc
agccccggggagcaaggagaccaaggcgccaagggggacccgggccgcccaggacgcaga
gggcccccgggagaagacggggccaaaggaagtaagggctatcaaggcaacaatggatcc
ccaggaagtcctggcgtgaagggcgccaagggtggaccagggccccgaggacccaaaggc
gagcctggacgcaggggagatcctggaaccaaaggcggcccaggcagcgatggccccaag
ggcgagaagggggaccctggccctgaggggccccggggcctggctggagaggttggcaac
aaaggagccaagggagaccgtggcctgcctggacccaggggcccccagggcgctctcggg
gagcccgggaagcagggatctcggggagaccccggggacgctggtcctcgcggagactca
ggacagcctggccccaagggagaccccggcaggcctggattcagctacccgggacccaga
ggagagcccggtgaggacaggggtacccctccacccggctcacctgtgcgtctgtctcag
gggggcagaggcgacttcggcatgaaaggagccccagggaggaaaggccagaagggcgag
cctgcagatcctggtccccctggtgagccgggccctcgtgggccgagaggagagccagga
ctcgagggagagcccggcccccccggagaccccggcctcacggagtgcgacgtcatgacc
tacgtgagggagacctgtggctgctgtgactgcgagaagcgctgtggcgccctggacgtg
gtgttcgtcattgacagctctgagagcatcggctacaccaacttcacgctggagaagaac
tttgtcatcaacgtggtcaacaggctgggggccatcgccaaggaccccaagtcagagaca
gggacccgcgtgggcgttgtgcagtacagccacgagggcaccttcgaggccatccagctg
gacgacgagcgcatcaactcgctgtccagcttcaaggaggctgtcaagaacctcgagtgg
attgcgggaggcacttggacgccttctgccctcaagtttgcctacaaccagctcatcaag
gagagccggcgccagaagacccgcgtgttcgctgtggtcatcacagatggccgccacgac
ccccgggacgatgacctcaacctgcgtgcgctctgcaaccatgatgtcacagtgacggcc
attggcatcggcgacatgttccacgagaggcacgagagcgagaacctgtactccatcgcc
tgtgacaagccacagcaggtgcgcaacatgacgctcttctccgacctggtggccgagaag
ttcatcgacgacatggaggacgtcctgtgcccagaccctcagatcgtgtgcccagacctg
ccctgccaaacagagctgtacgtggcccagtgcacgcagcggccggtggacatcgtcttc
ctgctggacggctccgagcggctgggtgagcagaacttccacaaggcccggcgcttcgtg
gaggaggtgtcccggcggctgacgctggcacgcagggaggacgacccgctcaacgcacgc
gtggcgctgctgcagttcgggggccgtgacgagcagcaggtggccttcccgctgacctcc
aacctgacggccatccacgaggcgctggccagcgcgcgctacctcaactccttctcgcac
gtgggcgcgggcatcgtgcacgccatcaactacgtggtgcaggacgcacgggccggggcg
cgccgccacgctgagctggcctttgtgttcctcacggacggcgtcacgggcaacgacagc
ctggaggaggcggtgcactccatgcgcaagcagaacgtggtgcccaccgtggtggccgtg
ggcagcgacgtggacgcggacgtgctctccaagatcagcctgggcgacgcggccgccgtc
ttccgagagaaggactatgacagcctggcgcagcccagcttcttcgacaggttcatccgc
tggatctgctag
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