Equus asinus (ass): 106843680
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Entry
106843680 CDS
T04645
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106843680 (PRDM1)
Transcription factors [BR:
eai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106843680 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2HE
zf-met
Motif
Other DBs
NCBI-GeneID:
106843680
NCBI-ProteinID:
XP_014716298
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All DBs
Position
24:28134944..28164561
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AA seq
824 aa
AA seq
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MLDIGLEKRVGTILAAPKCSSSAVRFQELAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGADGGTSVQAEASLPRNLLFKHSANSKEVIGVVSKEYIPKGTRFGPLIGEI
YNNDTVPKNANRKYFWRIYSRGELHHFIDGFKEEKSNWMRYVNPAHSAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSHPKQQSTEKNELCP
KSVPKREYSVKEILKLDSNPSKGKDFYRSNISPFTSEKDTDDFRKNGSPEVPFYPRVVYP
IRAPLPEDFLKASLAYGMERPTYITHSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGTTV
SPLAPGFQEPRDSYSYLNAPYGTEGLGSYPGYAPPPHLSSAFIPSYNAPYPKFLLPPYGM
NCNGLSTVGNINSINNFGLFPRLYPVYSNFLGGGSLPHPMLNPASLPSSLPSEGARRLLQ
PEHPREVLVPAPHSAFSLTGAAASMKDKACSPTSGSPTAGTAATSEHVVQPKATSVAMAA
PSSDEAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGE
RPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQ
CKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHLCSLKVHLKGNCPVAPATGLPL
EDLTRINEEIEKFDLSDNADRLEDMEDNIDVTSVVEKEILAVVRKEKEETGLKVSLQRNM
GNGLLSGCGLYESSDPSLMKLPHSNPLPLGPVKVKQETVEPMDP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgttggatattggcttggaaaaacgtgtgggtacgatcttggctgccccgaagtgtagt
tccagtgctgtgaggtttcaagagttggcagaggggaccgaggggaccatgaaaatggac
atggaggacgcagatatgactctgtggacagaggctgagtttgaagagaagtgtacatac
attgtgaatgaccacccctgggattctggcgctgacggagggacttcggtccaggcagag
gcatccttaccaaggaatctgcttttcaaacattctgcaaacagcaaagaggttattgga
gtggtgagtaaagaatacataccaaagggaacccgttttggacctctaataggtgaaatc
tacaacaatgatacagttcccaagaacgccaacaggaaatatttttggcggatctattcc
agaggggagcttcaccacttcatcgacggctttaaggaggagaagagcaactggatgcgc
tatgtgaatccggcgcactctgcccgggagcaaaacctggctgcgtgtcagaacggaatg
aacatctacttctacaccattaagcctattcctgccaaccaggagcttcttgtgtggtat
tgccgggactttgcggaaaggcttcactacccttatcccggagagctgacaatgatgaat
ctcacacaaacacagagccatcctaagcagcagagcactgagaagaatgaactttgccca
aagagtgtcccaaagagagagtacagcgtgaaagagatcctcaaactggactccaaccct
tccaaaggaaaggacttctaccgttcgaacatttcacccttcacttcagaaaaggacacg
gacgacttcaggaaaaatgggagccctgaggtgcccttctacccacgggtggtctaccca
atccgggcccctctgccggaagactttttgaaagcttccctggcctatgggatggagagg
ccaacttacatcactcactcacccattccgtcctccacaacaccaagtccgtcagcgaga
agtagccccgaccagagcctcaaaagctccagcccccacagcagcccagggaccacggtg
tcgcccctggctcctggcttccaggagccccgggactcttacagctacttgaacgctccc
tatggcaccgaaggtctgggctcttaccctggctacgcgcctcctccccacctctcatca
gccttcatcccctcctacaatgctccctaccccaagttcctcttacccccctatggcatg
aattgcaatggcctgagcaccgtgggcaatatcaacagcatcaacaactttggcctcttc
ccaaggctgtaccctgtctacagtaacttcctcgggggaggcagcctgcctcaccccatg
ctcaacccagcctcgctcccgagctcgctgccctctgaaggagcccggaggttgcttcag
cccgagcatccccgagaggtgcttgtcccggcgccccacagtgccttctccctcactggg
gccgccgccagcatgaaggacaaggcgtgcagccccaccagtgggtccccgactgcgggc
acagctgccacgtcggagcacgtggtgcagcccaaagctacctcagtggcgatggcagcc
cccagcagtgatgaagccatgaatctcattaaaaacaagagaaacatgactggctacaag
acacttccctaccccctgaagaagcagaatggcaagattaagtatgaatgcaacgtctgt
gccaagactttcggccagctctcgaatctgaaggtccacctcagagtgcacagcggagaa
cggccgttcaaatgtcagacttgcaacaagggctttactcagctcgcccacctacagaaa
cactacctggtacacacgggagaaaagccgcatgagtgccaggtttgccacaagcgattc
agcagcaccagcaatctcaagacccacctgcggcttcactcgggagagaaaccttaccag
tgcaaggtgtgccctgccaagttcacccagtttgtgcacctgaaactccacaagcgcctc
cacacccgggagcgaccccacaagtgtgcccattgccacaagagctacatccatctctgc
agcctcaaggtgcacctaaaggggaactgccctgtggccccggccacggggctgcctttg
gaagacctgacccggatcaacgaagagatcgaaaagtttgacctcagtgataatgccgac
cggctcgaggacatggaggacaacatcgatgtgacctctgtggtggagaaagagattctg
gctgtggtcagaaaagagaaagaagaaactggcctgaaagtatctttgcaaagaaacatg
gggaatggcctcctctcggggtgtggcctttatgagtcatcagacccgtccctcatgaag
ttgcctcacagcaacccactacctctgggacctgtaaaggtcaaacaagaaacagtcgaa
ccaatggatccttaa
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