Equus asinus (ass): 106844265
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Entry
106844265 CDS
T04645
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eai03009
]
106844265 (IGHMBP2)
03012 Translation factors [BR:
eai03012
]
106844265 (IGHMBP2)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106844265 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
106844265 (IGHMBP2)
Ribosome biogenesis [BR:
eai03009
]
Eukaryotic type
Other ribosome biogenesis factors
106844265 (IGHMBP2)
Translation factors [BR:
eai03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106844265 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
DEAD
Viral_helicase1
UvrD-helicase
nSTAND3
AAA_16
Helicase_RecD
AAA_22
SLFN-g3_helicase
AAA_25
IstB_IS21
PhoH
ABC_tran
NPHP3_N
Flavi_DEAD
Zot
AAA
DnaB_C
VWA_2
ATPase
NTPase_1
UvrD_C_2
Herpes_ori_bp
SRP54
Motif
Other DBs
NCBI-GeneID:
106844265
NCBI-ProteinID:
XP_014717096
UniProt:
A0A9L0JEP2
LinkDB
All DBs
Position
29:complement(1157707..1185967)
Genome browser
AA seq
984 aa
AA seq
DB search
MAAAAVESFVARQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCVSSAVLPSNSFTSGDIVGLYDAANEGSQLATGILTRITQKSVSVAFDE
SHDCQLSLDRESSYRLLKLANDVTYKRLKKALITLRKYHSGPASSLIEVLFGASAPSPAS
EIGPLTFCNASLDASQKEAVKFALSQKELAVIHGPPGTGKTTTVVEVILQVVKQGLKVLC
CAPSNIAVDNLVERLAQCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDI
DQVFVKNKKIQEKQEKSNFRSEIKLLRKELKEREEAAMLESLTSADVVLATNTGASPDGP
LKLLPDGYFDVVVIDECAQALEASCWIPLLKARKCVLAGDHKQLPPTIVSHKAALAGLSL
SLMERLDQEYGARVVRTLTVQYRMHQAIMQWASEALYAGQLTAHPSVAGHLLRDLPGVAA
TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVALHVQALVDAGVCASDIAVITP
YNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA
VTRARRHVAVICDSRTVNNHAFLKTLLDYCTVHGEVRTAFEYLDDIVPENYSHESSQGPG
QAGVKSRGSAAPARKAPRSRQQEGPRGARAAAGLGQKPGGRALGSEARCQPSLNGGSPEG
AESRDSADHFRALIADFMASEETQLEFPASLNSHDRMQVHQIAEEHGLRHDSTGEGRKRF
ITVSKRVPASPPAPPPPPGPVQTEPPVQEQSGRNPLDLKALHLERLQRERSGQERRAKDG
PQAAGSGPRKVPEKKKKKDGKGHAAMNLPAQEDFDALVSAAIKADNTCGFAKCTASVVTL
GQLCLHCGRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKDRALDPAKRAQL
QRKLDKKLGELTSQRKSKRQEREK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggccgtggagagcttcgtggccaggcagctggacctgctggagcttgag
agggacgcggaggtggaggagcgcaggtcctggcaggaaaacatctctctgaaggaactc
cagagccgaggcgtctgtctgctgaagctgcaggtgtccagccagcgcactgggctgtac
ggacggctgttggtcacctttgagccccggagatgtgtgtcttcggccgtgctgcccagt
aacagctttacttccggtgatatagtgggtctgtatgatgctgctaatgaaggcagtcag
ctggccactgggatcctgacccgcatcacccagaaatcggtctcggtggcctttgacgaa
tcccatgattgccagctgagcttggaccgagagagttcctacagacttttaaaacttgcc
aatgacgtcacgtataagcgactgaagaaagctctgattaccctcaggaagtaccattct
ggcccagcatcctcgctcatagaggtcctcttcggcgcgtcagcccccagtcccgccagc
gaaataggcccgctgacgttctgcaacgcctccctggacgcctcccagaaggaagctgtt
aagttcgcgctgtcccagaaggaactggccgtcatccacgggcctcctggcactgggaag
accaccacggtagttgaagtcatcctccaagttgtgaagcagggcttgaaggtgctgtgc
tgcgcgccctccaacatcgcagtggacaatctggtggagcgtctggctcagtgcaagcag
aggatcctgcgcctcgggcaccctgcccgacttctggaatccattcagcagcattccctc
gacgcggttttagcgcggagtgacaatgcacagattgtcgcagatatcagaaaggacatc
gaccaggtctttgtgaaaaacaaaaagatccaggagaagcaagagaaaagtaattttcgc
agtgaaatcaagctgctaagaaaagaactgaaggagcgggaggaggcggccatgctggaa
agcctcacgtcggcggacgtggtccttgcgacaaacacgggtgcttctcccgacggccct
ctgaagttgctgcccgacggctacttcgacgtggtggtcatcgatgagtgtgcccaggcc
ctcgaagccagctgctggatccccctgctgaaggccaggaagtgcgtcctggctggagat
cacaaacagctgccccccaccatcgtctctcacaaggctgcgctggccgggctgtcgctc
agcctgatggagcgcctggaccaggagtatggcgccagggtggtgcggacgctgaccgtg
cagtaccgcatgcaccaggccatcatgcaatgggcctcggaggccctgtatgccgggcag
ctcacggcgcacccttccgtggctgggcacctcctgcgggacctcccgggcgtggctgcc
acggaggagacgggcgtccccctgctgctggtggacacggctggctgcgggctctttgag
ctggaagaggaggatgagcagtctaaggggaaccctggtgaagtgcgcctcgttgctctg
cacgtccaggctctggtggatgctggtgtctgcgcgagtgacattgccgtcatcacgccg
tacaacctccaggtggacctgctcagacagagcctcgctcacaggcaccccgagcttgag
atcaagtctgtcgatggcttccagggccgggagaaggaggccgtgatcctgtccttcgtc
aggtctaataggaaaggggaagttggtttcctcgccgaggaccggcgcatcaatgttgct
gtcacccgcgctcggcgccacgtggcggtcatctgtgattctcgcactgtcaacaaccac
gccttcttgaagaccctgctggactactgcacagtgcatggggaggtgcgcacagccttt
gagtacctggacgacatcgtccccgagaactactcccatgagagctcccagggccctggc
caggctggcgtgaagtcgcgaggctctgctgcgcctgctaggaaggctcccaggagcagg
cagcaggaggggccccggggggcccgggcggctgccgggctgggccagaagccaggcggg
agggctttgggctctgaggcacgttgtcagcccagcctcaacggaggcagccccgaggga
gcagagagcagagacagtgcagaccacttcagggccctgatcgccgactttatggcaagt
gaggagacacaactggagtttcccgcctccctcaactcacacgacaggatgcaggtccac
cagatcgccgaggagcacgggctgaggcacgacagcaccggagagggcaggaagaggttc
ataactgtgagcaagagggtcccggcgagcccaccggccccacccccgccaccaggcccc
gtgcagacggagccccctgtccaggagcagagcggccggaacccgctggacctgaaggcc
ctgcacctggaaagactgcagagggagaggagcgggcaggagcggcgggccaaggatggg
ccacaggccgcaggctcagggccgcggaaggtgccggaaaagaagaagaagaaagatggt
aaaggacacgcggccatgaacctgcctgcccaggaggactttgatgccctcgtctcggct
gccattaaggctgataacacctgtggcttcgctaagtgcacagccagcgtggtgaccttg
ggccagctctgcctgcactgtggccgccggtactgcctcagccaccacctgcccgagatc
catggctgtggtgagcgggctcgagcccacgcccggcagaggatcagccgggaaggagtc
ctctacgctggcagtgggaccaaggacagggccctggacccagccaagagggcccagctg
cagaggaagctggataagaagttgggcgagctgaccagccagaggaagagcaagaggcag
gagagggagaagtga
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