Equus asinus (ass): 106844317
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Entry
106844317 CDS
T04645
Symbol
SAMD1
Name
(RefSeq) LOW QUALITY PROTEIN: atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eai03036
]
106844317 (SAMD1)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
106844317 (SAMD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
106844317
NCBI-ProteinID:
XP_044608959
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All DBs
Position
20:10978890..10981968
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AA seq
543 aa
AA seq
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MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPPRGPA
AAAAAPPPPXPAPPPPPAPXAPRPDRAPRAAAAAAAATAPPSPGPAPPPPRAQRAAPLAA
APPAPGAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQHQQPPPPPPQQQQRRRG
AAARAGGPARPVSLREVVRYLGGSGGPGPARLTRGRVQGLLEEEAAAARGRPERTRLGAL
ALPRGDRPGRAPPAASARASRSKRGGEERVLEKEEEEEDDEDEDDEDDVSEGSEVPEGDR
PAGAQHHQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGG
SASAATGPDSPSPVPLPPGKPALPGADGTPFGCPSGRKEKPADPVEWTVMDVVEYFTEAG
FPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDG
FLG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gctgcctcgtcgtccgctgcttccccccactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccgccgcgcgcccccccgcggggccccgcc
gccgccgccgctgcgccgccgccccccngccccgccccgccgccaccgcccgcgcccngc
gccccccgccccgaccgggcgccccgcgcggctgccgctgccgccgccgccacagcgccc
ccctcgcccggccccgcaccgccccccccccgcgcgcagcgggccgcgcccctggccgcc
gccccgcccgcgcccggcgctcctccggcggtggcgcccccggccggcccgcgccgcgcc
cccccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcg
ccgccacagcatcagcagccgccgccgccgccgccgcagcagcagcagcgccggaggggg
gcggcggcgcgggccggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctac
ctcggaggcagcggcggcccgggcccggcccgcctgacccgcggccgcgtgcaggggctg
ctggaggaggaggcggcggcggcgcggggccgcccggagcgcactcggctcggagcgctc
gcgctgccccgcggggacaggcccggacgggcgccgccggccgccagcgcccgcgcgtcg
cggagcaagagaggtggggaagagcgagtgcttgagaaggaagaggaggaagaagatgat
gaagatgaagatgatgaggacgatgtgtctgagggctctgaggtgcccgagggtgaccgt
cccgcaggtgcccagcaccaccagcttaatggcgagcggggccctcagagcgccaaggag
agggtcaaggagtggacaccctgcggaccccaccagggccaggatgaaggcagggggccg
gcaccaggcagtggcacccgccaggtgttctccatggcagccatgaataaggaaggagga
tcagcctctgctgccactgggccagactccccatctcctgtgcctttgcccccaggaaaa
ccagccctacctggggccgatgggaccccctttggctgtccttctgggcgcaaggagaag
ccggctgaccccgtggagtggacagtgatggacgtggtagagtacttcaccgaggccggc
ttcccagagcaggcaacagccttccaagagcaggaaatcgatggcaagtccttgctgctc
atgcagcgcacagacgtgctgacgggcctgtctatccgcctcgggccggccctgaagatc
tacgagcaccacatcaaggtgctgcagcaaggccactttgaggatgacgaccccgatggc
tttctaggctga
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