Equus asinus (ass): 106844453
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Entry
106844453 CDS
T04645
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
eai
Equus asinus (ass)
Pathway
eai04140
Autophagy - animal
eai04148
Efferocytosis
eai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106844453 (VPS16)
04148 Efferocytosis
106844453 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106844453 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eai04131
]
106844453 (VPS16)
Membrane trafficking [BR:
eai04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106844453 (VPS16)
Hops complex
106844453 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
106844453
NCBI-ProteinID:
XP_014717380
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Position
15:complement(19979784..19999807)
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AA seq
825 aa
AA seq
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MGHRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAASVRPVLEIYSASGM
PLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFSMGNEVLQNRVLDAR
IFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCWTTLCQDRVAHILLA
VGPDLYLLDHAACSSVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKL
CEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQFVLDEDSYLVPELD
GVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELG
QLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDRFPPDSFVRMCQDLRVLNAVRDY
HIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQ
QKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLK
MKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKYQELE
TLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQM
RLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTAL
ADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYTSRVGPEQKVKALLLVGDV
AQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggggcacaggaaatacgagctgtacagcatggactgggacctgaaggaggaactcagg
gactgcctggtggccgctgcgccctatgggggccccattgcactgctgaggaacccctgg
cggaaggagaaggctgccagtgtacggccggttctcgagatctactctgcttccggtatg
cctctggccagtctgctgtggaagagtgggcctgtggtgtccctgggctggtcagctgag
gaggagctgctctgtgtgcaggaagacggtgtagtactggtttacgggcttcatggtgac
ttccggagacacttcagcatgggcaatgaggtgctccagaaccgggttctagatgcccgg
atcttccatactgagtttggttctggggtggccattctcacaggggcccaccgcttcacc
ctcagtgccaatgtgggtgacctcaaactccgtaggatgccagaggtgccaggtctgcag
agtgcaccctcatgctggaccacactgtgccaggaccgagtggcacacattcttctggct
gtggggcccgatctttacctcctggaccatgcagcctgctcctcagtgacgccccctggc
ctggccccaggagtgagcagcttcttgcagatggctgtctccttcacctaccgacacctg
gcgctcttcacagacacgggctacatctggatggggacagcatcactcaaggagaagctg
tgtgagttcaactgcaacatccgggccccgccgaagcagatggtctggtgcagccgtcct
cgcagcaaggagagagccgttgtggtggcctgggagaggcggctaatggtggtgggcgat
gcacccgagagcatccagtttgtgctagatgaagactcctacctggtgcctgagctggat
ggggtccgcatcttctcccgcagcacccatgagttcctgcatgaggttccagtggccagt
gaggagatcttcaaaattgcttcaatggcccctggagcactgctgttggaagcccagaag
gagtatgagaaagagagccaaaaggcagatgagtacctgcgggagatccaggagctgggg
cagctgacccaggccgtgcagcagtgcatcgaggccgcaggacatgaacaccggccagac
atgcagaagagtctgctcagggcggcctccttcggaaagtgtttcctcgacagatttcca
cccgacagcttcgtgcgcatgtgtcaggacctgcgtgtcctcaatgccgttcgggactac
cacattgggatccccctcacctatagccaatacaagcagctcaccatccaggtgctgctg
gacaggcttgtattgcggaggctttacccactagccatccagatatgcgagtacctgcgc
cttcctgaagtgcagggtgtcagcaggattctggcccactgggcctgctacaaggtgcaa
cagaaggacgtgtctgacgaggatgttgctcgggccattaaccagaagctgggggacacg
cctggtgtctcttactctgacattgctgcgcgagcctatggctgcggccgcacagagctg
gccatcaagctgctggagtatgagccacgctctggggagcaggtaccccttctcctaaag
atgaagaggagcaaactggcactgagcaaggccattgagagtggggatactgacctggtg
ttcactgtgttgctgcacctgaagaatgagctgaaccgaggagattttttcatgactctt
cggaaccagcccatggccctgagtttgtaccggcagttctgtaagtatcaggagctagag
acgctgaaggacctttacaatcaggatgacaaccaccaggagctgggcagcttccacatc
cgagccagctacgctgcagaggagcgtattgaggggcgagtcgcagccctgcagacagct
gctgacgccttctacaaagccaagaatgagtttgcagccaaggccacagaggatcaaatg
aggctcctacggctgcagcgacgcctcgaagacgaactagggggccggttcctagacctg
tctctacatgacacggtcaccaccctcatccttggtggccacaacaaacgtgcagagcag
ctggcacgtgacttccgcatccctgacaagaggctctggtggctgaagctgactgccctg
gcagatctggaagactgggaggagctagagaagttttctaagagcaagaaatcacccatc
ggctacctgccctttgtggagatctgcatgaagcaacacaacaaatatgaggccaagaag
tacacctcccgcgtgggtcctgaacagaaagtcaaagccttgcttcttgttggggatgtg
gctcaggctgcagacgtggccattgagcaccggaatgaggcagagctgagccttgtcctg
tcccactgcaccggagccacagatggggccacagccgacaagattcagcgggccagggca
caagcccagaagaagtga
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integrated database retrieval system
