Equus asinus (ass): 106844486
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Entry
106844486 CDS
T04645
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
eai
Equus asinus (ass)
Pathway
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106844486 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106844486 (HNRNPM)
Spliceosome [BR:
eai03041
]
Common components
Common spliceosomal components
hnRNP proteins
106844486 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
106844486
NCBI-ProteinID:
XP_014717423
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Position
20:6118849..6155722
Genome browser
AA seq
763 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGAPGVPSGNGAPGPKGEGERPTQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNIGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERGMGGGFERDFARKEMRMSRSFGEPLGRGMEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV
ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMER
GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME
NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcggcgacagagcccaaaatggaggag
gagagcggcgcgcccggcgtgccgagcggcaacggggctccgggcccgaagggtgaagga
gaacgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgagccgtatgccaatccaactaagagatacagagccttcattacaaacatccctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgccgttgttgaattcaag
atggaagagagcatgaaaaaagctgccgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcccgatggtgaacatgccaggagagcgatgcaaaaggtg
atggctacgactggtgggatgggtatgggaccaggtggcccaggaatgattaatatccca
cccagtatcctaaataatcctaacatcccaaatgagattatccatgcattacaggctgga
agacttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtttttagtatggctggtgtggtggtccgagcagacattcttgaggataaagat
ggaaaaagtcgtggaataggcactgttacttttgaacagtccattgaagctgtgcaagct
atatctatgtttaatggtcagctgctgtttgatagacctatgcacgtgaaaatggatgag
agggccctaccaaagggagactttttccctcctgagcgtccacagcaacttccccatggc
cttggtggtattggcatggggttaggaccgggagggcagcctatcgatgccaatcacctg
aacaaaggcattggaatgggaaacataggacccgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccctttggtggtggtatggaaaacatg
ggtcgatttggatctgggatgaacatgggcagaataaacgagatggagcgtggcatgggt
ggaggatttgagagagactttgccagaaaggagatgagaatgtctcgaagctttggagag
ccccttggcagaggaatggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggaggtggaggcagtgtccctggaatcgagaggatgggccctggc
attgaccgcattgggggtgccggcatggagcgcatgggcgcaggcctgggccacggcatg
gatcgtgtgggctccgagatcgagcgcatgggcctggtcatggaccgcatgggctcagtc
gagcgcatgggctctggcatcgagcgcatgggcccactgggcctcgaccacatggcctcc
agcatcgagcgcatgggccagaccatggagcgcatcggctctggcgtggagcgcatgggt
gccggcatgggctttggcctcgagcgcatggccgcccccatcgaccgtgtgggccagacc
attgagcgcatgggctccggtgtggagcggatgggccctgccatcgagcgcatgggcctg
agcatggagcgcatggtgcccgcaggcatgggggctggcctggagcgcatgggccctgtg
atggatcgcatggccaccggcctggagcgcatgggcgccaacaacctggagcgcatgggc
ctggagcgtatgggcgccaacagtctcgagcgcatgggcctggagcgcatgggcgccaac
agcctggagcgcatgggtcctgccatgggcccggccctgggcgctggcattgagcgcatg
ggcctggccatgggtggcggcggcggtgccagctttgaccgcgccatcgagatggagcgt
ggcaactttggaggaagcttcgcaggctcctttggtggagcgggaggccatgctcctggg
gtggccaggaaggcttgccagatatttgtgaggaatctcccgtttgactttacatggaaa
atgctcaaggacaaattcaacgagtgtggccacgtgctgtatgccgacatcaagatggag
aatgggaagtccaaggggtgcggtgtggttaagtttgagtcgccagaggtggctgagcga
gcctgccggatgatgaatgggatgaagctgagtggccgagagattgatgttcgaatcgat
agaaacgcttaa
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