Equus asinus (ass): 106844873
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Entry
106844873 CDS
T04645
Symbol
TDRD12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eai03036
]
106844873 (TDRD12)
Enzymes [BR:
eai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
106844873 (TDRD12)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106844873 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
106844873
NCBI-ProteinID:
XP_044615663
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Position
26:4135484..4220949
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AA seq
1306 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSSFLDHEADYQKLNSAMNDFYNRMCHDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDLCEDTAEIAPARKWDSAAVQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTIKNEKVCVNDDLVAKNFACYVSPVESKNLDSLEKPRLDIKSASFSNKLNPA
LTLWPMFLQGKDSQGVKNSHGLTSLAQSLQHSWPKGVVGGRGPTAAILDKTIKCNMDSLR
DSPKKKSEKKQQCISLKDVNKCVESSVYWPTKRGITIYADPDIPAARAVCQKANEKSLRL
AEKKEYNEKNGCVKLLQFLNPDPLRADGISDLQQVQRSPWGARPPLAVLRNSIEPCLSLG
SSPLSADLKRALQRNKFPGPSHTESYSWPPIARGCDVVVIAHCGNDPLLYLPPVLTILQT
PGCYKSLPSRNGPLAVFVCPGWKKAQFVFELLGDYGTSSRPLHPVLLTIGLHKDEAKNMK
LPRGCDVIVTTPHSLLRLLRYQSLLFLRLCHLILDEVEVLFSEAREQMFAILDNFKKNIE
VEERESAPRQIVAVGVHWDRHVEHLLREFMSEPSVVITALEEGALYGSVQQVVHLCLECE
KTSTLLQTLDFIPSQAQKTLIFTCSVAETETVCKVVESSSIFCLKMHKEMVFDLKNVLEQ
WRKKLSSGSHIALALTDDCIPLLAITDATCVIHFSFPSSPKIFGGRLYCMSDHFHSSAEQ
GSPAEQGDIKTKSVLLLTERNACHAVGVLRYLERAEAKIPLELYEFTAGVLEAKEDEKAT
RPLCPYLKAFGFCKDKRLCPERHHINPETDAPRKLSNQAVPGFGCIKIIPLYILNATNYF
GRIVDKHVDLYATLNAEINEYFEDSSNKTTVEKVEKLGLYGLAEKTLFHRVQVLEKSQKD
DTWAPDNVLVKFIDEGRTALVPREQLLRLPERFHALPPQAVEFIVCRVKPADNEIEWNPK
VTRYIHHKIIGKLHDAKVIMALGNTVWIDPMVHITKLSNLKTSVVDYNVRAEILSMGMGV
DNSEHIEQLKKLYEGAKMPACEESLSQTLTPSSAEDAARQHTRQGDRGSERGAACEANSA
HQKHDALPEDTGGAPINKTPGPLQSFHPQIKWFQKDDVVILKIQLRNVKDCKCKYFRNRV
VFSAWVGEKFYLADMELQANIIKDDCKCMIQNDEPVITLAKARRESWCRLLKQRNPNVAF
DFDHWEECEEDSHFSRVVNSKNLSCKVTEWVESSDETSGDEGSESE
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtcctggtgctgaagattgaagatccaggttgtttctgggttattataaaa
ggatgtagttcctttttagatcatgaagctgactatcaaaaactaaatagtgccatgaat
gacttctataacagaatgtgtcacgatatagaaataaaaccgctaatgttggaagaaggg
caggtttgtgtggtttattgtcaggaactaaagtgctggtgcagggctgtgattaagtcc
atcgtgtcttcagcagaccattacctggcagaatgtttccttgtggattttgccaagtac
attccagtgaaatccaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
agagcgaaaaagttcagactgtactgcacaaagcctgtcacattgcacattgacctctgt
gaagacacggctgagattgcacccgccaggaagtgggacagtgcagctgttcagtacttt
cagaacattctaaaagcaactacccaggtggaagccaagttatgtgctgtggaagaagat
actttcgaggtttacctttatgtaactataaaaaacgaaaaggtttgtgtgaatgatgat
ctggttgcaaagaacttcgcttgttacgtgtcacccgtggagagtaaaaaccttgattct
ttagagaaaccaagactggatataaagtcagcatccttttctaataaactcaatccggcg
cttactctctggccaatgtttttgcaaggaaaggattctcaaggagtgaaaaattcgcat
ggtttaacttccctggcacagtctctccagcattcctggcccaagggtgttgttggtggc
cgggggcccaccgctgcgatcctggataaaactataaaatgtaatatggattcattgaga
gattcacctaaaaagaaatctgaaaagaaacaacagtgcatctctttaaaagatgtaaat
aagtgtgttgaatcttcagtgtactggccaacaaaaagaggcatcaccatatacgctgac
ccagatataccagcagcaagagctgtatgtcagaaggcaaatgagaaatcacttagattg
gctgagaagaaagaatacaatgagaagaatggctgtgtgaaattattgcagtttttaaat
cctgatcctttgagagctgatggaatctctgatctgcagcaggtgcagaggtcgccgtgg
ggcgcgcggccaccgctggccgtgctccggaacagcatcgagccgtgcctgtccctcggc
tcgtcgccgctctccgcagacctgaaaagggctcttcaaagaaataagtttccaggacct
agccacaccgagtcttactcttggcctcccatagcacgtggctgtgacgtggtcgtcatt
gctcactgtggaaatgaccctctgctgtaccttccacccgtgcttacgattttgcagaca
ccgggttgctacaagtcgttaccgagtagaaatggacctctggcagtcttcgtgtgccct
ggatggaagaaggcccagtttgtttttgaattattgggagactacggcacgtcctccagg
ccgcttcatcccgtgttgttaaccatcggactccacaaggatgaagccaaaaatatgaag
cttccacggggctgtgacgtgattgttacgacaccacacagcctcctgagactgctcaga
tatcagagcttgttgtttcttagactctgtcacctgatcctggacgaggtggaggtatta
ttctctgaagccagggaacaaatgtttgctatattagataactttaaaaaaaatattgaa
gttgaagaaagggaatcggcaccccgtcagatcgttgcggtcggagttcactgggacaga
cacgtggagcatttgctccgagagttcatgagcgagccgtccgtggtgatcacggccctg
gaggagggcgctctctatggcagtgtgcagcaggtggtgcatctttgcctagaatgtgaa
aaaacctctactttactccaaactcttgatttcatcccaagtcaggcacaaaagacgctg
atcttcacctgttctgtagctgaaacagaaacagtgtgcaaggtagtagaaagcagttcc
atattctgcttgaaaatgcacaaagagatggtttttgatttaaaaaatgttttagagcag
tggaggaagaagttaagttctggctctcacattgcgttagccttgactgatgattgcatc
ccgctcctggccatcactgatgccacgtgtgtgattcacttcagctttccttcctctcca
aaaatttttggtggacgcctatattgcatgtctgatcattttcacagttcagccgaacag
ggttctcctgcagaacagggagatataaaaaccaaatctgtgttgctgctgacggagaga
aatgcatgccatgcagttggtgtcctgcgctacttggagcgagcagaggccaagattcca
ctggagctgtacgagttcactgccggggttctggaagccaaagaagacgaaaaagccacc
aggcctctttgtccgtatcttaaggcttttggtttttgcaaagacaaaagactctgtcct
gagcgacaccatattaatccagaaacagacgcgccaaggaaactgtccaaccaggctgtg
ccggggtttgggtgtattaaaataatacccttgtatattttgaatgcaacaaattacttt
ggtcgtatcgttgataaacatgtggatctttacgcaactcttaatgctgaaataaatgag
tattttgaggattccagtaataaaacgactgttgagaaggtggagaaacttggattatat
ggattagcagaaaagacactttttcacagggttcaggtgctggagaaaagccaaaaagat
gacacctgggcccccgacaacgtcctcgtgaagtttatagacgagggcaggactgcactc
gtcccgagggagcagctgctgcgcctccccgagcgcttccacgcgctgcccccccaggcg
gtggagtttattgtttgtagagtgaagcctgctgacaacgaaatcgaatggaatcccaag
gttactcggtacattcatcataaaattattggaaaactgcatgatgcaaaggtgataatg
gctttgggaaatacagtttggattgacccaatggtgcacattacaaagctttccaatttg
aaaacttctgtcgttgattataatgttcgagctgaaattttgtcaatgggaatgggcgtt
gataattcagaacatatagaacaactgaaaaaattatacgaaggagccaaaatgccagct
tgtgaagaaagcctgagccaaaccctgacgccttcatcagcagaagatgccgctcggcag
cacacacggcaaggggacaggggctcagaaagaggtgcggcctgcgaggcaaattcagca
caccagaagcatgacgctttacctgaagacactggaggtgctcccattaacaaaactcca
gggcctctgcagagcttccacccacaaataaagtggttccaaaaagacgatgtggtcata
ttaaagatacaactaaggaatgtaaaagattgcaaatgcaaatatttcagaaatagagtt
gtgttcagtgcctgggtgggagagaaattttacttggctgatatggagctgcaggccaac
atcataaaagatgattgcaaatgcatgatccaaaatgatgaacctgtcatcactcttgca
aaggcgagacgggagtcgtggtgtcgcttactcaaacagcggaatccgaatgtggctttt
gactttgatcactgggaagaatgtgaagaggatagccacttctccagggttgtaaattcc
aaaaatctctcctgcaaagtgacagagtgggtggagagcagtgacgaaacttccggagat
gagggaagtgagagtgaatga
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