Equus asinus (ass): 106844958
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Entry
106844958 CDS
T04645
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
eai
Equus asinus (ass)
Pathway
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106844958 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106844958 (EXOSC1)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106844958 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106844958 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
106844958
NCBI-ProteinID:
XP_014718208
UniProt:
A0A9L0I402
LinkDB
All DBs
Position
2:78003791..78010362
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AA seq
195 aa
AA seq
DB search
MAPPVRYCVPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVVSVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccgtgaggtactgcgtccccggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggtacctacacccggcacggctacatcttttcgtcgcttgctggctgc
ctgacgaagagcagcgagaatggcgcgcttcctgtcgtgtctgtgatgagagaaacagag
tcccaattactgcctgatgtgggggctattgtaacctgtaaggtctctagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacaccacttaagaactcttttcga
ggaactatccgcaaagaagatgtccgagctactgaaaaagacaaggttgaaatttacaag
agtttccgcccaggtgacattgtcttggccaaagtgatctccttaggtgatgcacagtcc
aactacctcctgaccactgctgagaatgagctgggggtcgtggtggcccacagtgaatcg
ggtgtccagatggtgcccatcagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccggaaagtggctcgagtacagcctgaattcctgcagacctaa
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