Equus asinus (ass): 106845069
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Entry
106845069 CDS
T04645
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
eai
Equus asinus (ass)
Pathway
eai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106845069 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eai03041
]
106845069 (PRPF40B)
Spliceosome [BR:
eai03041
]
Complex A
U1 snRNP components
U1 related factors
106845069 (PRPF40B)
Complex B
106845069 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
106845069
NCBI-ProteinID:
XP_044611903
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All DBs
Position
22:complement(18720269..18734046)
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AA seq
829 aa
AA seq
DB search
MVPPMMPGMLMPAVPVTAATAPGADTASSAVGGTGPPRALWSEHVAPDGRIYYYNADDKQ
SVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQE
AAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTSVPTGLLEPEPGGSEDCDVSEAAQPLEQ
GFLQQPEEGPSSSAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSN
ASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLE
QHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQ
ALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREE
EEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQ
PGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAAL
DAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRE
RFVCDSAFEQITLESERIRLFREFLQTECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESE
EEELPPPSLRPSKRRRRNPSESGSEPSSSLDSGESGGAALGGRGSPSSRLLLGSDHGLRK
AKKPKKKTKKRRHKSVRREGTSTQGPAVCEVSSTRLLGCPSQELRGALGSYRTVLRVRQT
LRRKLARRVMKKSQNRTRTGSSGEQSSLTAPQALESRRRRRAGTRRKAS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtacctcccatgatgccaggaatgctgatgccagcggtgcccgtcactgcagcgacg
gctccaggtgcggacaccgccagctctgctgtgggtgggacaggtcctccgagggcccta
tggagtgagcatgtggcccctgatgggcgcatctactactacaatgctgacgacaagcag
tccgtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctgctgtcccagtgt
ccctggaaagagtacaagtcggacacaggcaaaccttactactataacaaccagagtaag
gagtcccgctggacccggcccaaggacctggatgacctggaggctctagttaaacaggag
gctgcagggaaacagcagcagcagctgccacagacactacagccgcagcctcctcagcca
caacctgaccccccacctgcgcctcctggccccacctcagtgcccacaggcctcctagaa
cctgagccaggtgggagtgaagattgcgatgtgtcagaggctgcccagcccctggagcag
gggttccttcagcagccggaggagggccccagcagttctgctggacagcatcagccacca
cagcaggaggaggaagaatcaaagccagaaccagagaggtctggcctcagttggagcaat
cgggagaaggcaaagcaggccttcaaggagctgctaagggacaaggctgtcccctccaac
gcctcgtgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgccc
aaactgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggag
aaagaagaggcccggctaagggccaaggaggccaagcagaccttgcagcatttcctggag
cagcacgaacgcatgacctccaccacccgctaccggcgggcagaacagacctttggggaa
ctggaggtctgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctc
ttcttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaacatccag
gccctgaagagcatcctggatggaatgagtagcgtcaacttccaaaccacatggtcccag
gcccagcagtacctcatggataaccccagctttgctcaggaccaccagctgcagaacatg
gacaaggaagatgcgctgatctgctttgaggagcacatccgagctttggagagggaggag
gaggaggagcgagagcgggcccgtcttcgagagcggcgccagcaacgcaagaaccgggag
gccttccagaccttcctggacgagctgcacgagactgggcagctgcactctatgtccacc
tggatggagctgtacccagcagtcagcactgatgtccgctttgccaacatgctgggccag
ccgggctccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattc
catgatgagaagaagatcattaaggacatccttaaggaccggggcttctgcgtggaggtg
aacacagcctttgaagacttcgcccacgtcataagctttgacaagagggctgctgcgctg
gacgcaggcaacatcaagctgaccttcaatagtctgttggagaaagcagaggcgcgggag
agagagagggagaaggaggaggcacgaaggatgcggcgcagggaagctgcctttcgaagc
atgctgaggcaggccgtgcctgctctggagctgggcactgcctgggaagaggtccgtgag
cgctttgtgtgcgactcagcctttgagcagatcaccctggagtcggagcggatccggctc
ttccgggagtttctgcagactgaatgccagcacctccacaccaaaggccgaaaacatggc
agaaagggcaagaagcaccatcgcaagcgttcccactcgccctcaggctctgagtcagaa
gaggaggagctgcccccaccgtctctccggccctccaagcggaggaggcggaacccctcg
gagtcaggctctgagccctcttcctcacttgattccggtgaaagtgggggtgctgccctt
ggaggacgaggctccccatcctcccgccttctccttggatcagatcatggtcttcggaaa
gccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcggtgcgtagagaagga
acttctacccaaggccctgctgtttgtgaggtctcttccacccgcctcctgggctgtcct
tcacaggaactgaggggggctctgggctcttacagaacagtcctgagagtgagacagacc
ctgaggagaaagctggcaaggagagtgatgaaaaagagccagaacaggacaaggacaggg
agctccggcgagcagagctccctaaccgctccccaggctttggaatcaagaaggagaaga
cgggctgggacacgtcggaaagcgagctga
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