Equus asinus (ass): 106845093
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Entry
106845093 CDS
T04645
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106845093 (TNRC6C)
03036 Chromosome and associated proteins [BR:
eai03036
]
106845093 (TNRC6C)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106845093 (TNRC6C)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106845093 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
THOC7
DUF4718
Motif
Other DBs
NCBI-GeneID:
106845093
NCBI-ProteinID:
XP_014718473
LinkDB
All DBs
Position
13:60239480..60338299
Genome browser
AA seq
1893 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTKTCSSQPQPAGPSASTSTSTLSNSSNG
KRAPASSQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGALTSVSPSQSAGPAGVSP
PPIPGAGAQQHPSKLQPDLSHSGLADHYETSHWGQQPTYRSEATRSWDKVTIDRTDKEAW
PSITGTETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGTNGALVQS
PSNQSALGAGGANGNGSAARVWGVAAGSSSGLPHCSLSGGDGKMDNMIGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGAVATGNSSSICSPVSAVGQNMGNHNGNPAGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTKPMNPPPNPSNAMQANGLPNWGM
AVGMGAIIPPHLQGLPGANGSSASQVSGGGGEGIGSSVWGLSPANPATGNSNSGFNQGNG
DTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPAGPGILAWGRGSGNNAVGNIHSGAWGH
PSRSTSTSVNGEWGKPPNQHSNSDINGKGSTGWDSPSVSSQNPAMQPGSEHMNSWAKAAS
SGTTASEGSSDGSGSHNEGSTGREGAEGRRRDKGIVDQGHIQLPRNDLDPRVLSNTGWGQ
TPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQPSNSGGKNDGSIMNSTNTSSVSGWVS
SPPAAVPANTGWGDSSNKAPNGPGVWGDSISSTAVNNAAAAKSGHAWSGTINQEDKSPTW
GEPQKSKSQNWGDGQKANPAWSAGAGDWADSSSVLGHLGDGKKAGSAWDADSNRSGSGWN
DATRSGTSGWGNGTNAKVNPGTNWGESLKPGPQQNWASKPQDNNMGNWGGAASVKQTGAG
WIGGPVPVKQKDNGEATGWEEPSPPSIRRKMEIDDGTSAWGDPSSYTNKTVNMWDRNNPG
LQNSTTANSTTTTTTTSNSTNVGETPPSHQASAPLNRSPLLGPVSSGWGEMPNVHSKPES
SWGEPSSPSTLVDNGTAAWGKPPSSGSGWGDQPAEPAVTFGRAGAPAAAPALCKPASKSM
QEGWGSGGDDMNLGTGQWEEEEGSMWNNAASQESTSSCSSWGNASKKGLQKGVKTSGKQD
EAWIMNRLIRQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDMDKRGLGVPDYNGM
VTKPLGCRPPISKESSVDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQALGG
IASGLGMQNLNSSRQIPSGNLGVFGSSGAAQARTMQQPPQPPVQPLNSSQPSLRAQVPQF
LSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTLLNQLYQLQLAYQRLQIQQQMLQAQR
NVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKPPPPPPHLSLHPSAGKSAVDSF
PPHPQAPGLPDLQTKEQQPSPSTFAPHPLAGLNPNMNVNSMDMTGGLSVKDPSQSQSRLP
QWTHPSPMDSVPGAASPLLDQNPSKHGAIPGGLGIGPPAKSSIDDSYGRYDLIQNSESPA
SPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTG
PTINTTIQDVNRYLLKSGGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTAAPTRPPPG
LTTPKPSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQH
GPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQ
ALPPTSSWQSSTGTSQTRLGASGSSHGLVRSDAGHWNAPCLAGKGSSDLLWGGVPQYSSS
LWGPPSSDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacctactaagacctgttcaagccagccc
caacctgccggtcccagtgccagtacttccaccagcactctctccaacagcagcaatggc
aaacgtgcacctgccagcagccagcagccagctgcctcccgttacctgcctcgagaggtg
cctccacgcttccgccagcaagaacagaagcagctgttaaagagaggtcagccgctgcct
acaggggctctgaccagtgtgagcccgagccagagtgccgggcccgcgggggtaagccct
cctcccatccctggagccggagcacagcagcatcccagcaagctccagccagatctcagt
cacagtggattggcagatcattatgaaacttcccactggggacagcagcccacttacaga
agcgaagccacccgcagctgggataaagtgacaatagacaggactgataaggaggcgtgg
ccttccatcacaggaacagagactgaatctgcctcagaatgtactacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgcccagggcaacttc
actggacatactaagaagaccaatggcaataatggcaccaatggcgcactcgtccaaagc
ccttcgaatcagagtgcccttggagcagggggagcaaacggtaatggaagtgcagccagg
gtgtggggcgtagctgcaggctccagctccggcctgcctcactgctctctcagtggtggg
gatgggaaaatggacaacatgatcggagatgggagaagtcagaattgctggggtgcttcc
aactccaatgctggcattaatcttaaccttaatcctaatgccaacccagctgcctggcct
gtgcttggacatgaaggagctgtggcgacaggcaactcttccagtatttgcagtccagtc
agtgccgtaggccaaaatatgggcaaccacaatgggaacccagcaggcactttgggtgct
tggggaaacttgctgccacaagagagcacagagccacaaacgtccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaagcccatg
aaccctccaccaaaccctagcaatgcaatgcaggcaaatggactgccaaactggggcatg
gctgttggtatgggcgccatcatcccaccccacctgcaaggccttcctggtgctaatgga
tcatcagcttctcaagtcagtgggggcggtggtgaaggaattggcagttctgtgtgggga
ctatccccagctaaccctgccacaggaaatagcaattctgggttcaatcaggggaatgga
gacactgtgaactcagcattaagtgctaaacaaaatggatccagcagtgctgtgcaaaag
gaagggaatggaggaaacgcttgggattcgggacctcctgctggtcctggaatcctcgct
tggggaaggggcagtggcaacaatgccgtaggtaatatccattcgggagcttggggccac
cccagccgaagcacctctaccagtgtgaatggagagtggggaaagcccccaaaccagcat
tccaatagtgacatcaatgggaaaggatcaacagggtgggatagtcctagtgttagcagc
cagaatcctgccatgcagcccggcagtgaacacatgaactcttgggccaaagctgcatct
tctggaactacagcaagtgaaggaagtagtgatggttctggcagtcacaatgaaggaagc
actgggagggaaggagcagaaggccgaaggcgagataaagggattgtagaccaagggcac
atccaattgccaaggaacgatcttgacccaagagttctgtctaatactggttggggacag
actccagtaaagcaaaacactgcctgggaatttgaagaatcccctaggtctgagagaaaa
aatgacaatgggacagaggcctggggttgtgcagctactcagccttcaaactcagggggg
aagaacgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgggtcagc
tcaccacctgctgctgtgccagcaaacacaggttggggagacagcagcaacaaagcgcca
aatggcccaggggtttggggggactcgataagctctactgctgttaataatgctgctgct
gccaagagtggccacgcttggagtgggaccataaatcaggaggacaagtcacccacctgg
ggtgagcctcaaaaatccaaatctcagaactggggagatggacagaaagctaatccagcc
tggagtgcaggagcgggagactgggcagattcatcttctgtccttggacacttgggggat
gggaaaaaagctggctctgcatgggatgccgacagtaatcggtcagggtctggttggaat
gatgctacaaggtctgggaccagtggctggggcaatggcacaaacgcaaaggtaaatcca
ggtacaaactggggagagtctttaaaacctggcccccaacagaactgggccagcaagccc
caagacaacaacatgggtaactggggcggagccgcttccgttaaacagacaggagcaggg
tggatcggggggccggtccctgtcaaacagaaggacaatggtgaggccacgggctgggaa
gaaccttctcctccatccattcgacgcaaaatggaaattgatgatggtacctcagcttgg
ggcgacccgagcagttacaccaacaaaactgtaaacatgtgggatagaaacaacccaggc
ctccagaacagtaccacagccaacagcaccaccaccaccaccaccacgagtaacagcacg
aacgtgggcgagacaccgccctcacaccaggccagcgccccgctgaatcgatcgccactg
cttggcccagtgtcctcaggctggggagaaatgcctaatgttcattccaagcctgagagc
tcttggggagagccctcctccccttccaccctggttgacaacggcacggcagcgtggggc
aagccgccgagcagtggcagcggttggggggatcagcctgctgagccagcggtgacattc
ggaagagccggggctcccgctgccgccccagccctgtgcaaaccagcttcaaaatctatg
caagaaggctggggcagtggtggggatgacatgaacctcggtactggtcagtgggaagag
gaagaagggagcatgtggaacaatgctgcttcccaagaaagcacctcctcctgcagttcc
tgggggaacgcctccaaaaaaggactccaaaagggcgtgaaaacgtctggcaagcaggac
gaggcctggatcatgaaccggctcatcagacaactcacagacatgggcttcccgagagag
ccagctgaagaggccttgaagagtaataatatgaaccttgaccaggccatgagcgctctg
ctggaaaagaaggtggacatggacaagcgtggactgggagtgcctgactacaatggaatg
gtcaccaaaccccttggctgccgcccaccaatctccaaagagtcttccgtggaccgcccc
acctttcttgacaaggatggcggcctagtggaagagcccacgacttcaccatttttgcct
tcaccaagcctgaagctccccctttcaaacagtgcactccctaatcaggccctgggtggg
attgcctcagggctgggcatgcaaaacttgaattcctctagacagataccgagtggcaat
ctgggtgtatttggcagcagcggagcagcacaagccaggaccatgcaacagccgccgcag
ccgcccgtgcagcctctgaactcctcccagcccagtctccgtgctcaagtgcctcagttt
ctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaac
cctgcactattaacctcgccaattaatcctcagcatatgacgctgttgaaccagctctat
cagctgcagctggcgtaccaacgtttacaaatccagcagcagatgttacaggcccagcgt
aatgtttccggacccatgagacaacaggagcagcaagttgcgcgcacaatcactaacctg
cagcagcagatccagcagcaccagcgccagctggcccaggccctgctcgtgaagccgccg
ccgcccccgccacacctgtctctgcacccttctgcaggcaaatcggccgtggacagcttc
cccccccacccccaggcccctggcctgcctgacctgcagaccaaagagcagcagccttcg
cccagcacctttgctccgcaccctctcgctggactgaacccaaacatgaatgtcaacagc
atggacatgactggtggtttgtcagtgaaggacccgtcccagtcccagtcgcgcctccct
cagtggacacaccccagcccgatggacagcgtacccggtgctgcttctcctctcctggat
cagaaccccagcaagcatggtgctatccctggaggtctaggcattgggcctccagctaag
tcctccattgacgactcctatgggcggtacgatttaatccagaacagtgagtcaccagcc
agtcctcctgtagctgttccccatagctggtcgcgtgccaaatctgacagtgataaaatc
tcaaatggctccagcatcaactggcccccagaattccaccctggagttccgtggaaagga
cttcagaatatagatcctgagaatgaccctgacgtcactcctggaagtgtccccaccggg
cctaccatcaatactaccatacaggatgtcaaccgctacctcctcaagagtggaggtaaa
ctttcggacattaaatcaacgtggtcctctggccctgcctcccacacgcaagcctctctg
tctcatgaactgtggaaggtgcccagaaacactgctgcacccacaaggccacctccaggg
ttaaccacccccaagccttcctccacctggggagccagtccccttggctggaccagctct
tactcctcgggttctgcttggagcactgacacctcaggaagaacaagcagctggctcgtt
ctccgcaacctcacgccccagatcgatggctcgacgctgcggacgctgtgtttgcagcac
ggccctctcatcacgttccacctgaacctgactcaaggcaacgctgtggtccggtacagc
tccaaggaggaagccgccaaggcccagaagtccctgcacatgtgtgttctgggaaacact
accatcttggccgagttcgctggcgaagaagaagtgaatcgtttcttagcccaaggccaa
gcgctgccgcccacctccagctggcagtccagcactggcaccagccagacacggctgggc
gcctcgggcagctcccatggcctggtgcggagcgacgctggccactggaacgccccgtgc
ctggcaggcaaagggagcagtgacctgctgtggggtggggttccacagtactcaagcagc
ctgtggggcccacccagcagcgacgacggcagggtgataggaagccccaccccgctgaac
actctgcttcccggcgaccttctcagtggcgagtccatctag
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