Equus asinus (ass): 106846486 Help Entry 106846486         CDS       T04645                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism eai  Equus asinus (ass) Pathway eai03082   ATP-dependent chromatin remodeling eai04714   Thermogenesis eai05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:eai00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     106846486 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     106846486 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     106846486 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:eai03021]     106846486 (SMARCC1)    03036 Chromosome and associated proteins [BR:eai03036]     106846486 (SMARCC1) Transcription machinery [BR:eai03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      106846486 (SMARCC1) Chromosome and associated proteins [BR:eai03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     106846486 (SMARCC1)    PBAF complex     106846486 (SMARCC1)    GBAF(ncBAF) complex     106846486 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 Chromo BRCT_2 DUF919 SpeFL Motif Other DBs NCBI-GeneID:  106846486 NCBI-ProteinID:  XP_044609919 LinkDB All DBs Position 21:complement(57491560..57664733) Genome browser AA seq 1150 aa AA seqDB search SAPERGWLGGAGKRRWRLRARACANGKRREGRGGPGGGDDGRRRWAAAAGSGGLGGAAAG ATSAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLGKHYKKYVHADAPTNK TLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWR RFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTF TDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVDAEIED PPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRD RKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPT PVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAITTGGKEDEDPSKGDQSRSV DPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMI DTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPH FNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSK GASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD ASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVE AHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMETDTDGQQPEKAEN KGENETDEGDKAQDGENEKNGEKEQDSEVSEDAKSEEKETDENKELTDTCKERESDIGKK KVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFE ELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHVQNPQQAHQHSG GPGLATLGTAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQPMPGRMIP TVAANIHPPGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQQPPPPPADGVPPPP APGPPASAAP NT seq 3453 nt NT seq  +upstreamnt  +downstreamnt tcggcgccggaaaggggctggctgggcggggccgggaagcggcggtggcggctgcgcgcg cgcgcctgtgcgaacgggaagcgccgcgagggtcggggcgggccgggcggtggggacgac ggacggcgacgatgggccgcggcggcgggcagcggcgggttggggggggcggcggcgggc gccacgagtgcaggaggtgcggcggcggccgcaggcctggccgtttatcggcggaaggac gggggcccggccagcaagttttgggagagcccggagacggtgtcccagctggattcggtg cgggtctggctgggcaagcactacaagaagtatgttcatgcagatgctcctaccaataaa acgctggctgggctggtggtacagcttcttcagttccaggaagatgcctttgggaagcat gtcaccaacccggccttcaccaaactccctgcaaaatgtttcatggatttcaaagctgga ggcaccttgtgtcacattcttggggctgcttacaagtataaaaatgaacagggatggcgg aggtttgatcttcagaatccatcccgaatggatcgtaatgttgaaatgtttatgaacatt gaaaaaacattggtgcagaacaattgtctgaccagacccaacatctacctcattccagac attgatctgaagttggctaacaaattgaaagatatcatcaaacgacatcaggggacattt actgatgagaagtcaaaagcttcccaccacatttatccatatccttcctcacaagaggat gaagaatggttgagaccagtgatgagaaaagacaagcaggtgttagtgcattgggggttt tacccagacagctatgatacttgggtccatagtaatgatgttgatgcagaaattgaagat ccaccaattccagaaaagccatggaaggttcatgcgaaatggattttggacactgatgtt ttcaatgaatggatgaatgaggaggattatgaggtggatgagaacaggaagcctgtgagt tttcgtcagcgaatttcaacaaagaacgaagagccagtcagaagtccagagagaagagat agaaaagcatcagctaatgctcgaaagaggaaacattcgccttcccctccgcctcccaca cccacagaatcccggaagaagagtgggaagaaaggccaagctagtctttatgggaagcgc agaagtcagaaagaagaggatgagcaggaagatcttaccaaggacatggaagacccaacc cctgtacccaacatagaggaagtcgtgcttccgaaaaatgtaaacccaaagaaagatagt gaaaatacacctgttaaaggaggaactgtagcagatctagatgaacaagatgaagaagca atcacgacaggaggaaaggaagatgaagatcctagcaaaggtgatcagagtcggtcagtt gaccctggtgaagataatgtgacagagcagaccaatcacatcatcattcctagctatgca tcatggtttgattataactgtattcatgtgattgaacggcgtgctcttcctgagtttttc aatgggaaaaacaagtcgaagactccagagatatacttggcatatcgaaattttatgatc gacacatatcgcctaaaccctcaagaatatttaactagcactgcttgtcggaggaacttg actggagatgtgtgtgctgtgatgagggttcatgcctttttagagcaatgggggctcgtt aattaccaagtggatccagaaagtcgacccatggcaatgggaccgcctccgactcctcat ttcaatgtattagctgatactccatctgggcttgtgcctctacatcttcgatcaccacag gtccctgctgctcagcagatgttaaattttcctgagaaaaacaaggaaaaaccaattgat ttgcagaactttggtcttcgtactgatatctactccaagaaaaccttagcaaagagtaaa ggtgctagtgcgggaagagaatggactgaacaggaaacccttctactcctggaggccctg gagatgtacaaggatgattggaacaaagtatcagaacatgttggaagtcgtactcaggat gaatgcatcctccactttttgaggcttcccattgaggacccataccttgagaattcagat gcttctcttgggcccttggcctaccagcctgtccccttcagtcaatcaggaaacccagtc atgagcactgttgcttttttggcatctgtggtggaccctcgtgtggcatctgctgcagca aaagcagctttggaggaattttctcgggttcgggaagaggtacccctggaattggttgaa gctcatgtgaagaaagtacaggaagcagcacgagcctctgggaaagtggatcccacctat ggcctggagagcagctgcattgcaggcacagggccggatgaaccagagaaacttgaagga gctgaagaggaaaaaatggaaacagatactgatggtcagcagcctgaaaaggcagaaaat aaaggggaaaatgaaacagatgaaggtgataaagcacaagatggagaaaatgaaaaaaat ggtgagaaggaacaggatagtgaagttagtgaggatgccaaatcagaagaaaaggagact gatgagaacaaggaactcactgatacttgtaaagaaagagaaagtgatattggaaagaaa aaagtagaacatgaaatctctgaaggaaatgtagccacagccgcagcagctgctcttgcc tcagctgcaaccaaagccaagcacctggctgctgtggaggaaaggaagatcaagtctctg gtagctctcctggttgagacgcagatgaagaagctagagatcaaactgcgacattttgag gagctggagactatcatggacagagagaaagaggctttagaacaacagaggcagcagttg cttactgaacgccaaaactttcacatggaacaactgaaatatgctgaattgcgagcccga cagcaaatggaacagcagcagcatgtgcagaaccctcaacaggcacaccagcattcagga ggacctggcctggcaacacttggaacagcagggcaccctggcatgatgcctcatcagcag ccccctccctaccctctgatgcaccaccagatgccgccacctcatccaccccagccaggt cagataccaggcccaggttccatgatgcctgggcagcccatgccaggccgaatgattccc actgttgcggccaacatccacccccctgggagtggccctacccctcctggtatgcctcca atgccaggaaacatcttaggaccccgggtacccctcacggcacctaatggcatgtatccc cctccgccgcagcagcagcagccgccaccaccacctgcagatggagtccctccacctcct gctccaggcccaccagcctcagctgctccctag

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