Equus asinus (ass): 106847455
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Entry
106847455 CDS
T04645
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106847455 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106847455 (CSTF2T)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106847455 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
106847455 (CSTF2T)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106847455
NCBI-ProteinID:
XP_014722222
UniProt:
A0A9L0KAK1
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Position
2
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AA seq
614 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGICPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPAPGPIPTGVPGPGPGSLTPGGAMQPQVGMPGVGPVPLERGQVQ
MSDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHH
ASGHDNRGPSSHEMRGGPLADPRLLIGEPRGPMMDQRGLPLDGRGSRDSRGMETRAMETE
VLETRVMERRGMETCAMEARGMEARGMDARGMEIRGPGPSSRGPMTGGIQGPGPINMGAG
GPQGPRQVPSISGVGNPGAGMQGAGIQGAGMQGAGIQGSGMQGAGMQGAGIQGVGMQGAG
IQGTGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSI
LILKEQIQKSTGAS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccagccatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggccactgaggagcagttaaaggacattttctccgaggttggt
tctgttgtcagtttccggctggtatacgatcgagagacgggaaaacccaaggggtatggc
ttctgcgagtatcaagaccaggagaccgcgcttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgctgccagtgaaaagaacaaggaggag
ttgaagagcctagggcctgcagcgcccatcattgactccccctacggggaccccatcgat
ccggaagatgccccagaatcaattaccagggcagttgctagtctccccccggagcaaatg
tttgagctgatgaagcagatgaagctgtgtgtccaaaacagtcaccaggaagctcgaaac
atgttacttcaaaacccccaactggcttacgccctgttacaggcgcaagtagtgatgagg
atcatggatccagagattgctttgaaaattctgcatcgcaagatacatgtcacaccgctc
atcccaggcaaatctcagcctgtctctggccctggccctgggatctgcccaggacctaat
gttctactgaaccagcagaatcctccagcccctcagcctcagcatttggctagaagacct
gtgaaagacatccctcctctgatgcagacccctatccagggtggaattccagccccaggg
ccaataccaactggggttcccggacctggtcctggttccttaactcctggtggagcaatg
cagccccaagttggaatgccaggggttggtcctgtgcctttagagcggggacaggtgcag
atgtcggatcctagagctcctatgcctcgtggacccatgactgctggtggcctgcctcct
cgaggactgttaggagatgcaccaaatgacccacgtggagggactttgctctcagtcact
ggagaagtagagcccagaggctatcttggcccacctcatcagggtccccctatgcaccat
gcctctggtcatgacaaccgtggcccttcctcacatgagatgaggggagggccattagca
gatcccagactgctaattggagagcccagaggacccatgatggatcaaaggggtctacct
ttggatggtagaggtagtagagattctcgagggatggagactcgagccatggaaactgag
gtcttagagacacgagtaatggagagaagaggaatggagacctgtgcaatggaagccaga
gggatggaagcaagaggcatggatgcaagaggaatggagataaggggccctggccccagt
tcgagaggccctatgactggtggaatccagggtcctggtcccattaatatgggggcaggt
ggtcctcagggacccagacaggtcccaagcatttcaggggtgggaaatcctggagctggc
atgcagggggcaggcatacaaggagcaggcatgcagggagcaggcatacagggatcgggc
atgcagggagcgggcatgcagggagcaggcatacaaggagtgggcatgcagggggccgga
atacaaggaacgggcatgcagggggcaggtaagcaaggtggaggccagcctagcagtttt
agtcctgggcagagccaagtaactccccaggatcaagaaaaggcagctttgatcatgcag
gttcttcaactgactgcagatcagattgccatgctgcctcctgagcaaaggcagagcatc
ctgattttaaaggaacaaatccagaagtctactggagcttcttga
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