Equus asinus (ass): 106848355
Help
Entry
106848355 CDS
T04645
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
eai
Equus asinus (ass)
Pathway
eai04659
Th17 cell differentiation
eai04710
Circadian rhythm
eai05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
106848355 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
106848355 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
106848355 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106848355 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eai03310
]
106848355 (RORC)
Transcription factors [BR:
eai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106848355 (RORC)
Nuclear receptors [BR:
eai03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106848355 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106848355
NCBI-ProteinID:
XP_014723657
LinkDB
All DBs
Position
25:11700786..11725344
Genome browser
AA seq
519 aa
AA seq
DB search
MDRAPQRHRRASQELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQQQREQAAKTPPAGGQGADPLPCTLGLPDGQLPLGSSPDLPEASACPPGLLRA
PGSGPSYSNSLAKAGLNGASYHLEYSPERGKAEGRESFYSTGSQLTPNRCGLHFEEPRHP
GLGEPRQGLDSYCSPGFRSTTEAPYASLTETEHLVQNVCKSYRETCQLRLEDLLRQRSNI
FSREEVASYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAME
VVLVRMCRAYNADNHTVFFEGKYGGMELFRALGCSELISSIFDFSRSLSALRFSEDEIAL
YTALVLINANRPGLQEKRKVEQLQYNLEMAFHHHLCKTHRQGILAKLPPKGKLRSLCSQH
VEKLQTFQHLHPIVVQAAFPPLYKELFSTEMESPEGLSE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccgccgagcctcacaggagctgctggctgcaaagaag
acccacacctcacaaatcgaagtgatcccttgcaaaatctgtggggacaagtcgtctggc
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccggagccagcag
tgtaacgtggcctactcttgcacccgtcagcagaactgccccatcgaccgcaccagccgg
aaccgatgccagcactgccgcctgcagaagtgcctggccctgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcaaagggacagcctgcatgccgaagtgcagaag
caactgcagcagcagcagcagcagcagcaacgggaacaagcagccaagacccctcctgca
ggaggccaaggagcagaccccctcccctgcaccttggggctcccggatgggcagctgccc
ttgggctcctcgcctgacctgcctgaggcctctgcctgtccccctggcctcctgagagcc
ccaggctctgggccttcctactccaatagcttggccaaggctggtctcaatggggcctca
taccacctcgagtacagccctgagcggggcaaggctgagggcagagagagcttctatagc
acgggcagccagctgacccccaatagatgtggacttcattttgaggaacccaggcatcct
gggcttggggaacccagacagggcctggacagctactgcagccccggtttccgcagcacc
acagaggcaccttatgcttccctgacggagactgagcacttggtacagaacgtgtgtaag
tcctaccgagagacgtgtcagctgcggctggaggacctgctacggcagcgctccaacatc
ttctcccgggaggaggtggccagctaccagaggaagtcaatgtgggagatgtgggaacgc
tgcgcccaccgcctcaccgaggccattcagtacgtggtggagtttgctaagaggctctca
ggctttatggagctctgtcagaatgaccagatcgtgctactcaaagcaggagcaatggaa
gtggtgcttgtcaggatgtgccgggcctacaacgccgacaaccacacagtcttttttgaa
ggcaaatacggtggcatggagctgttccgagccttgggctgcagtgagctcatcagctcc
atcttcgacttctcccgctccctgagtgccttacgcttttccgaggatgagattgccctc
tacacagcccttgtcctcatcaacgccaaccggccaggactccaagagaaaaggaaggta
gaacagctgcagtacaatctggaaatggcctttcatcaccatctctgcaagactcatcgc
caaggcatcctggcaaagctaccacccaaggggaagcttcggagcctgtgcagccagcat
gtggaaaagctgcaaacctttcagcatctccaccccatcgtggtccaagctgctttcccc
ccactctacaaggaactcttcagcactgaaatggagtcacctgaggggctgtctgagtga
DBGET
integrated database retrieval system
