Equus asinus (ass): 123289680
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Entry
123289680 CDS
T04645
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
123289680 (SOX1)
Transcription factors [BR:
eai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123289680 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123289680
NCBI-ProteinID:
XP_044635622
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Position
11:complement(1762545..1764193)
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AA seq
393 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGTGGGGGGGGGGGGGGGGAKANQDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGG
GYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAH
PHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAA
AAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAA
AAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcattcgcctggcggcgcccaggcccccacg
aacctgtcgggcccagccgggacgggcggcggcgggggtggcgggggcggcggcggcggc
gggggcggcggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatg
gtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcc
gagatcagcaagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcggccg
ttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaag
taccgcccgcgccgcaaaaccaagacgctgctcaagaaggacaagtactcgctggccggc
gggctgctggcggccggcgcgggcggcggcggcgcggccgtggccatgggcgtgggtgtg
ggcgtgggcgcggcggccgtgggccagcgcctggagagcccgggcggcgcggcgggcggc
ggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcg
gcggcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgct
ggcggcgcgcatccgcacgcgcacccggcgcacccgcacccgcaccacccgcacgcgcac
ccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatc
tccaactcgcagggctacatgagcgcctcgccctcgggctacggcggcctcccctacggc
gccgcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcggcg
gcggcggcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctcggctcgctcgtc
aagtcggagccgagcggcagcccgccggcccccgcgcactcgcgcgcgccgtgccccggg
gacctgcgcgagatgatcagcatgtacttgccggccggcgagggcggcgacccggcggcg
gcggcggcggccgcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcg
ggcgcgggcgtgaacggcacggtgcccctgacgcacatctag
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