Equus asinus (ass): 123290225
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Entry
123290225 CDS
T04645
Name
(RefSeq) protocadherin gamma-B5-like
KO
K16496
protocadherin gamma subfamily B
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eai04515
]
123290225
Cell adhesion molecules [BR:
eai04515
]
Cadherins
Protocadherins
123290225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
123290225
NCBI-ProteinID:
XP_044636738
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All DBs
Position
12:18685298..18690851
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AA seq
1037 aa
AA seq
DB search
MGSGAGENGWAERRPVLFPFLLSLFWPALSEQIRYRIREEMPGGSVVGNLAKDLGLSVLE
LPTRKLRVSSEKPYFTVSAESGELLVSSRLDREQICGKKSACALEFEAVAENPLNFYHVN
VEIEDINDHMPKFTQNSFELQISESTLPGTRFILEVAEDADIGLNSLQNYKLSLSPSFSL
INKEKQDGSKYPELTLEKPLDREQQGYHRLVLTALDGGDPPLSGTTELRIQVTDANDNPP
VFHQDVYRVSLRENVPPGTAVLQVSATDQDEGVNSQITYSFYRTGQVFDVNSKSGEITTL
RTLDFEEIKKYSIVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHTLVENILENAVPGT
LIALIKIHDQDSGENGEVNCRLEGEVPFQIISSSKNSYKLVTDGTLDREQTPEYNVTITA
TDRGKPPLSASISVTLHITDVNDNAPVFQQASYVVHVAENNPPGASIAQVSASDPDLGPN
GRVSYSIVASDLEPRALSSYVSVSAQSGVVLAQRAFDHEQLRAFELTLQARDQGSPALSA
NASLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWL
SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLLLVF
ADSLQEALPDLGDHPAPSEPQAELQFYLVVALALISVLFLLAVILAIALRLRSSSSPAAW
GCFQPGLCVKSGPGVPPNYSEGTLPYSYNLRKKEPKESACRESIPKKIRSETTMAAPRNR
PHHTALVLLCLFLGRLWEIRASQIHYSVPEETEKGYIVGNISKELGLEPRELAERGVRIV
SRGRTQLFALNPRSGSLVTAGRIDREELCAQSTRCLVNFKVLVEDRVQLYGIEIEVTDIN
DNAPKFQTENLEVKINEIAAPGTRYPLPEAVDRDVGLNSLQSYQLSPSHHFSLDVQTGDD
GTINPELVLERALDREEEAAHHLVLTASDSGDPRRSSTVHIQVTVLDTNDNAPVFAQPIY
RVKVPEDVPQGTRLLTM
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggcgctggggagaacggctgggctgagaggcggccagtgctctttcccttc
ctgctgtctttgttctggcccgcgctgtcggagcagatccgctacaggattcgcgaggaa
atgcccgggggctcggtggtggggaacctcgccaaggacctgggactgagcgtcctggag
ttaccaactcgaaaactgcgcgtcagttccgagaagccttacttcactgtgagcgcagag
agcggggagttacttgtgagcagcaggctagaccgggagcagatatgtgggaagaagtca
gcctgtgctcttgaatttgaggctgttgctgaaaacccattgaacttttatcacgtgaat
gtggagatcgaggatattaatgaccacatgccaaaattcacacaaaattcctttgagcta
caaataagtgagtctacactgccaggcacccgatttatattagaagtagcggaagatgca
gatattggcttaaactctctgcagaattataaactctctcttagtcctagtttctcattg
ataaataaggagaaacaagatggtagtaaatacccggaactgacattggagaaaccctta
gacagggaacaacagggttatcatcgtttagtcctcactgcgttggacggcggagaccca
cccctaagcggcacaactgagctgcgcatccaggtcactgatgccaatgataacccccca
gtattccaccaggacgtgtacagggtcagccttcgagaaaacgtgcccccaggcactgct
gtgctgcaggtgtcagccactgaccaggatgagggtgttaactcccaaatcacttattcc
ttctacaggaccgggcaagtctttgatgtgaattcaaagagtggggaaattacaactcta
aggacactggattttgaagaaatcaagaaatattccatagtggtggaagggagggatggc
ggaggactggttgcacaatgtacggttgaaattaacattcaagatgaaaatgacaacagc
ccagaagttacattccatactctagtcgaaaacattctggaaaacgcagtgcctggaacg
ctaattgctttgatcaaaatacatgaccaagattctggggagaatggggaggttaattgt
cgattagagggtgaagtcccttttcaaataatctcttcctccaaaaattcttataaattg
gtaacagacgggaccctggaccgagagcagactccagagtacaatgtcaccatcacagcc
actgacaggggcaagccgcccctctctgccagcataagtgtcaccttgcacatcactgac
gtcaacgacaatgctccggttttccagcaggcctcttacgtggtccacgtggccgagaac
aacccgcccggcgcctccatcgcccaagtcagcgcctcagatcccgacctgggacccaac
ggccgcgtctcctactccatcgtggccagcgacctggagccgcgggcgctgtcgtcctac
gtgtcggtgagcgcgcagagcggggtggtgttggcgcagcgcgccttcgaccacgagcag
ctgcgcgccttcgagctgacgctgcaggcccgcgaccagggctcgcccgcgctcagcgcc
aacgcgagcctgcgcgtgctggtgggcgaccgcaacgacaacgcgccaagggtgctgtac
ccggcgctggggcccgacggctcggcgctcttcgacacggtgccgcgcgccgcgcagccc
ggctacctggtcaccaaggtggtggcggtggacgccgactcgggacacaacgcctggctg
tcctaccacgtgctgcaggccagcgagcccggactcttcagcctggggctgcgcacgggc
gaggtgcgcacggcgcgtgctttgggcgacagggacgcggcccgccagcgcctgctggtc
gccgtgcgggacgggggacagccgcccctctcggccaccgccacgctgctcctggtcttc
gcagacagcctacaagaggcgctgccggacctcggcgaccatcctgcaccctctgagccc
caggctgagcttcagttttacctggtggtggccttggccttgatctctgtgctcttcctg
ctcgcggtgattctggccattgccctgcgcctgcgaagctcctccagccccgccgcctgg
ggctgctttcagcctggtctctgcgtcaagtctggacctggggttccccccaactacagc
gaagggactttaccttattcctacaatttgaggaaaaaagaacctaaggagtcagcgtgc
agagaaagcattccgaaaaaaatccgtagtgaaacaacaatggccgctccaaggaatcgc
ccgcaccacacagcactggtcctgctgtgccttttcctggggagactgtgggagatcagg
gccagtcagatccactactcagtgcctgaagagacagaaaaaggctatatcgtggggaat
atctctaaggagctggggctggagccccgggagctggcggagcgcggagtccgcatcgtc
tccagaggtaggacgcagctctttgctctgaacccgcgaagcggcagcttggtcaccgcg
ggcagaatagaccgggaggagctctgcgctcagagcacgcggtgtctggtgaactttaaa
gtcctggttgaagacagagtgcagctttatggaatagaaatagaagtaactgatataaac
gacaatgccccaaaattccagaccgaaaatctggaagtaaaaattaacgaaatcgctgca
cctggaacgcgttatccactcccagaggctgttgaccgggatgtgggcttgaattccctg
cagagctaccagctcagccccagtcaccacttctccctggacgtgcaaactggagacgac
ggaactataaacccagagctggtgctggagcgggccctggaccgtgaggaagaggctgct
caccacctggtcctcaccgcctccgacagcggcgatccgcgtcgttccagtacagtgcac
atccaggtgacagtgttggatacaaacgacaatgcccctgtttttgctcaaccgatttac
cgagtgaaagtcccagaggacgtgccccagggcacccgtctgcttactatgtaa
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