Candidatus Electrothrix aestuarii: Q3M24_00215
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Entry
Q3M24_00215 CDS
T10293
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
eaj Candidatus Electrothrix aestuarii
Pathway
eaj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
eaj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q3M24_00215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaj03021
]
Q3M24_00215
Transcription machinery [BR:
eaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q3M24_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
XCN73224
UniProt:
A0AAU8LWF7
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All DBs
Position
complement(47481..48992)
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AA seq
503 aa
AA seq
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MKNQRERSSKVYEEEEANLSSDSKDDCQEKEEEVIADDNRDMHSNDPMNIYLREMGSLDL
LSYEEEIKLAQKLEEGEARIQNAVLRLTLGLKTLNSLRKGLERGSMRIGSVLNGISDSDE
KELGEVRTAFLTCIEEANRLNKERKVLFQELKEKIGSREEEKLWQEIGAIGLRVVELFRP
YRISSKKLLSTAKAVEEFNEKLKKVRVQADREALLAAHKGESAANAQANGLRVNLNLAET
IGVHCQSFDELFMEVKGGKDTVRDAKKTLVRANLRLVISISKKFLNRGMLLPDLIQEGNI
GLMKAVEKYDYNRGYKFSTYATWWIRQSINRGIADQGRTIRLPVHMIEAINRMLRFTRDF
QRIESREPSVEEMADQLDADVDYVHAALKTARDAISLDAPVGDEEDTMLSDFIVDDINPG
PQEFSITESLKRCLAKVMGELTEREEQVLRMRYGIEVGCDHTLEEVGQRFDVTRERIRQI
EAQAIKKLRHPSRSKYLEPFMLD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaacgggaaagatcttcaaaggtctacgaggaagaggaagcgaatttgtca
agtgactctaaggatgattgccaagagaaggaggaagaggtgattgcggatgataatcgg
gatatgcacagtaatgatcccatgaatatctatctccgcgagatgggaagtcttgatcta
ctcagctacgaggaagaaatcaaactagcgcagaaactggaagaaggagaagctcggatt
cagaatgctgtgcttcgtctgaccttagggctgaagaccttgaacagcctgcgaaaaggt
ttggaacgagggagcatgcgtattgggtccgtgttaaacgggatctccgatagcgatgaa
aaagaactgggggaggtgcggacggcctttcttacctgtattgaagaagcaaacaggctg
aataaggaacggaaggtactttttcaggagctgaaagaaaagataggcagcagagaagag
gaaaaactttggcaggagatcggggcgattggtctgcgggttgtcgagttattccgtccc
tatcgaatcagttctaaaaaattgctttcaacggccaaggctgttgaagagtttaacgaa
aaattaaaaaaggttcgtgttcaggctgatagagaggccttgttggcagcccataaggga
gagagtgcggccaatgcccaggcaaatggactgcgagtcaaccttaacctggcagagacc
attggtgtgcattgccagagtttcgacgaactctttatggaagtaaaaggaggtaaggac
actgtcagagatgcgaagaagacccttgttcgggcaaatttacgtctggtgatctctatc
tccaaaaaatttctcaacagaggcatgttgctgcccgacttgattcaggaaggtaatatc
ggcctgatgaaggcagttgagaaatacgactataaccgggggtataagttttctacctat
gcaacgtggtggatacgtcagtctattaatcgcggtatagccgatcagggcaggacaatc
aggttgcctgtgcatatgattgaagcaattaatagaatgcttcgttttacacgggatttc
cagcgaatcgaaagccgggagcccagcgtcgaagaaatggcggaccagctggatgccgat
gtggactatgtacatgccgcattgaaaacagcccgtgatgcgatttctcttgatgcaccg
gtgggagatgaagaagacaccatgctcagtgactttattgttgatgatattaatcctggc
cctcaggaattctccatcacagagagtcttaaacgctgcctcgccaaggtgatgggtgag
ctgactgagcgggaggagcaggtgcttcgtatgcgctacggtatcgaggtcggttgcgat
cataccctggaggaagtgggacagcgttttgatgtaacccgggagaggatccgtcagatc
gaagcccaggctatcaaaaagcttcgtcatccttcccgaagtaaatatcttgaaccgttt
atgcttgactaa
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